Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 229586298

GI number: 229586298

Start: 79486

End: 80253

Strand: Direct

Name: soj [H]

Synonym: RAF_ORF0081

Alternate gene names: 229586298

Gene position: 79486-80253 (Clockwise)

Preceding gene: 229586297

Following gene: 229586299

Centisome position: 6.22

GC content: 28.65

Gene sequence:

>768_bases
ATGAAAGTAATTGCTATTGTTAATCAAAAAGGAGGGGTAGCTAAAACTACAACTACTGTGAATTTAGCTACAGCTTTTGC
TGCTGTAAATAAAAAAATTTTAGTTATAGATCTTGATCCTCAAGGGAATAGTAGTACCGGTTTTGGAGTTAGTCAGCAAC
AACGCAAAAATACTATATACCAAGTATTAACAAATTTAATAGAATTGCAAGATGCAATAATTTCTACAGATATACCAAAT
TTAGAAATAATTACTTCAAACACTAATCTATCTGCGGCTGAATTAGACTTAACAAAATTAAAGGACCGAGAATATATTTT
AATGAAGCTATTGGCAGAAATAAAAATATTATATGATTATATAATTATTGATTGCCCTCCTTCATTAAATTTATTAACGG
TAAACGCTTTAGTTGCAAGCGATGAAGTACTGATTCCAATGCAATGTGATTTTTATTCTTTAGAAGGATTAAGTCATTTG
TTAAAAACAATTGAAATTGTAGAGAAAAAATTAAATCCTAAGATAAAGATTGCAGGTATATTATTTACAATGTATGATAA
GCGTAATCGTTTAACGGAACAAGTAGAAGATGATGTTAGAAAATGCTTAGGAGAATTAGTATTTAAAACCGTTATTCCAA
GAAATATTAAACTATCTGAAGCTCCTTCATATGGAAAACCGGCTATTATATATGATTATAAATGTTCGGGAGCAGTTGCA
TATATAGAACTTACAAAAGAAATCTTAGAAAGATATGGCGAAAAATAA

Upstream 100 bases:

>100_bases
TAGAAGCTAAAGAGAGATGGTTATTTGGTTATTTAATACATCAAAGTATTACTTGTGAAGAAGGGAAAATTCTAGAAGTT
AGTAATTTAACAAAAATGAT

Downstream 100 bases:

>100_bases
AGGACTAGGAAGAGGATTATCTTCATTACTTGGAGAAGAAGTTATTTCTATAGAATCAGAAATAGTACAAATAATAAATA
TTGATAAAATAAGACCAAAC

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKVIAIVNQKGGVAKTTTTVNLATAFAAVNKKILVIDLDPQGNSSTGFGVSQQQRKNTIYQVLTNLIELQDAIISTDIPN
LEIITSNTNLSAAELDLTKLKDREYILMKLLAEIKILYDYIIIDCPPSLNLLTVNALVASDEVLIPMQCDFYSLEGLSHL
LKTIEIVEKKLNPKIKIAGILFTMYDKRNRLTEQVEDDVRKCLGELVFKTVIPRNIKLSEAPSYGKPAIIYDYKCSGAVA
YIELTKEILERYGEK

Sequences:

>Translated_255_residues
MKVIAIVNQKGGVAKTTTTVNLATAFAAVNKKILVIDLDPQGNSSTGFGVSQQQRKNTIYQVLTNLIELQDAIISTDIPN
LEIITSNTNLSAAELDLTKLKDREYILMKLLAEIKILYDYIIIDCPPSLNLLTVNALVASDEVLIPMQCDFYSLEGLSHL
LKTIEIVEKKLNPKIKIAGILFTMYDKRNRLTEQVEDDVRKCLGELVFKTVIPRNIKLSEAPSYGKPAIIYDYKCSGAVA
YIELTKEILERYGEK
>Mature_255_residues
MKVIAIVNQKGGVAKTTTTVNLATAFAAVNKKILVIDLDPQGNSSTGFGVSQQQRKNTIYQVLTNLIELQDAIISTDIPN
LEIITSNTNLSAAELDLTKLKDREYILMKLLAEIKILYDYIIIDCPPSLNLLTVNALVASDEVLIPMQCDFYSLEGLSHL
LKTIEIVEKKLNPKIKIAGILFTMYDKRNRLTEQVEDDVRKCLGELVFKTVIPRNIKLSEAPSYGKPAIIYDYKCSGAVA
YIELTKEILERYGEK

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28472; Mature: 28472

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIAIVNQKGGVAKTTTTVNLATAFAAVNKKILVIDLDPQGNSSTGFGVSQQQRKNTIY
CEEEEEEECCCCCEEEEEEHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
QVLTNLIELQDAIISTDIPNLEIITSNTNLSAAELDLTKLKDREYILMKLLAEIKILYDY
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHE
IIIDCPPSLNLLTVNALVASDEVLIPMQCDFYSLEGLSHLLKTIEIVEKKLNPKIKIAGI
EEEECCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LFTMYDKRNRLTEQVEDDVRKCLGELVFKTVIPRNIKLSEAPSYGKPAIIYDYKCSGAVA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCEEE
YIELTKEILERYGEK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVIAIVNQKGGVAKTTTTVNLATAFAAVNKKILVIDLDPQGNSSTGFGVSQQQRKNTIY
CEEEEEEECCCCCEEEEEEHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
QVLTNLIELQDAIISTDIPNLEIITSNTNLSAAELDLTKLKDREYILMKLLAEIKILYDY
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHE
IIIDCPPSLNLLTVNALVASDEVLIPMQCDFYSLEGLSHLLKTIEIVEKKLNPKIKIAGI
EEEECCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LFTMYDKRNRLTEQVEDDVRKCLGELVFKTVIPRNIKLSEAPSYGKPAIIYDYKCSGAVA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCEEE
YIELTKEILERYGEK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9054507 [H]