| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is pyrG
Identifier: 229221137
GI number: 229221137
Start: 757682
End: 759286
Strand: Direct
Name: pyrG
Synonym: Bd0808
Alternate gene names: 229221137
Gene position: 757682-759286 (Clockwise)
Preceding gene: 42522383
Following gene: 42522385
Centisome position: 20.03
GC content: 51.15
Gene sequence:
>1605_bases TTGAAGCAAAAATTTATTTTTGTCACCGGGGGCGTTGTTTCCTCGATTGGCAAAGGACTGACAGCAGCCAGCCTTGGTGC TTTGCTGGAAGGCCGCGGTCACAAAGTGACCATCATGAAATTTGATCCTTATTTGAACGTGGATCCTGGCACAATGTCGC CATTGCAGCACGGTGAAGTTTATGTGACTGAAGATGGGGCGGAAACCGATCTGGATCTGGGGCACTATGAGCGTTTCACA TCCGCTTTGATGAACCGCTCAAACTCTGTTTCCACCGGTCAGATCTATGACACGGTTTTGAACCGCGAGCGTCGCGGGGA CTACCTGGGTGGCACTGTGCAGGTCATTCCGCACATCACGGAAGAAATCAAAGCTCGTATCTATGAAGCCGCTCAGGGCA GTGAAATCATTCTGGTTGAAATCGGCGGGACAGTCGGGGATATCGAAAGTCAGCCGTTCCTGGAAGCCATTCGTCAGATG CGTATCGATGTGGGTCAGGAAAACTCTGTGCTGGTGCATGTGACTTATGTGCCGTACATCGCGGCGGCGGGTGAATTGAA ATCCAAGCCGACTCAGCACTCAGTGAAAGAGCTGCGTGAAATCGGTTTGCAACCCGACTTCCTGGTCTGCCGCAGTGAAA AAGTCATTGATGACAATCTGAAGGCCAAAATCGGTCTGTTCTGTTCCGTGAAACCGGAAAATGTTATCGCCGCTCAGGAC AGTCGTTTTATCTATGAAGTCCCTCTGGCTTTGCACAGAGAAAAGCTGGATGAACTGATCGTGGCACGTCTGGGCCTTTC TGCTGGCAAGTTGAACATGAAAGGCTGGCAGAATCTGGTGAAGATTCTGGGGAACCCAAGTCATACTGTGAAAATCGGCG TGGTTGGCAAGTATGTCGATTTGAAGGAATCCTACAAATCCCTGCATGAAGCCTTGGTTCACGGTGGCGTTGCCAACAAT GCCCGCGTGGAAATCATTTACGTGGATTCCGAAAAGGTCACCGACAAGACTGTGCACTCTTTATTGGGCAAGGTCGACGG CATTCTGGTGCCGGGGGGCTTCGGCACCCGTGGTGTGGAAGGCAAGATCACTGCCATCAAGTATGCCCGTGAAAAGCGGG TTCCATTCTTCGGTATCTGTTTTGGTATGCAATTGTCGGCGATTGAGTTTGCGCGCAACGTGTGTGGTATCAAAGATGCC ACCAGCCGTGAATTCCATGCTGAAAACAAACGCACTGGCAACTTCGTGATTGATTCCATGGCCGAGCAGCGCGGAGTGAT CAACAAGGGTGGCACCATGCGCCTGGGCGCTTTCCCATGCGCTATTGCCTCCGGCTCGCGCGCCTATCAGGTGTACAAGG CGTCGTCCATTATGGAACGTCACCGTCACCGTTTTGAGTTCAACAACAAGTATAAAGACTTGTTTGAAAAGAACGGCATG ATGGCTTCCGGTATCTGCAAAGAACGTGACCTGGTCGAGATTGTGGAACTTCCTGATCACCCATGGTTTGTCGGCGTGCA GTTCCATCCGGAATTCAAATCAAAGCCCTTGGCTCCGCACCCTCTCTTCGTGCATTTTGTTAAAGCAAGCCTGAAGAAGA AGTAA
Upstream 100 bases:
>100_bases TGGCGCGACTCGAAAAACTCTTAAGCTCACAGGGGATGTAATGGCAAAGAGAAAGACCACCACAAAGAAGGTGTCGACAG CGAAGTCGACCAAGAAAACG
Downstream 100 bases:
>100_bases GAAAGGTTCGTTAGAATATGTCCAAAGTTATTCAACAGGGTCTGAAAGTTCTAGAGGTTGAGGCCCAGGCCATTCTGGCA TTGAAAGAGCGCCTTGGGGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKQKFIFVTGGVVSSIGKGLTAASLGALLEGRGHKVTIMKFDPYLNVDPGTMSPLQHGEVYVTEDGAETDLDLGHYERFT SALMNRSNSVSTGQIYDTVLNRERRGDYLGGTVQVIPHITEEIKARIYEAAQGSEIILVEIGGTVGDIESQPFLEAIRQM RIDVGQENSVLVHVTYVPYIAAAGELKSKPTQHSVKELREIGLQPDFLVCRSEKVIDDNLKAKIGLFCSVKPENVIAAQD SRFIYEVPLALHREKLDELIVARLGLSAGKLNMKGWQNLVKILGNPSHTVKIGVVGKYVDLKESYKSLHEALVHGGVANN ARVEIIYVDSEKVTDKTVHSLLGKVDGILVPGGFGTRGVEGKITAIKYAREKRVPFFGICFGMQLSAIEFARNVCGIKDA TSREFHAENKRTGNFVIDSMAEQRGVINKGGTMRLGAFPCAIASGSRAYQVYKASSIMERHRHRFEFNNKYKDLFEKNGM MASGICKERDLVEIVELPDHPWFVGVQFHPEFKSKPLAPHPLFVHFVKASLKKK
Sequences:
>Translated_534_residues MKQKFIFVTGGVVSSIGKGLTAASLGALLEGRGHKVTIMKFDPYLNVDPGTMSPLQHGEVYVTEDGAETDLDLGHYERFT SALMNRSNSVSTGQIYDTVLNRERRGDYLGGTVQVIPHITEEIKARIYEAAQGSEIILVEIGGTVGDIESQPFLEAIRQM RIDVGQENSVLVHVTYVPYIAAAGELKSKPTQHSVKELREIGLQPDFLVCRSEKVIDDNLKAKIGLFCSVKPENVIAAQD SRFIYEVPLALHREKLDELIVARLGLSAGKLNMKGWQNLVKILGNPSHTVKIGVVGKYVDLKESYKSLHEALVHGGVANN ARVEIIYVDSEKVTDKTVHSLLGKVDGILVPGGFGTRGVEGKITAIKYAREKRVPFFGICFGMQLSAIEFARNVCGIKDA TSREFHAENKRTGNFVIDSMAEQRGVINKGGTMRLGAFPCAIASGSRAYQVYKASSIMERHRHRFEFNNKYKDLFEKNGM MASGICKERDLVEIVELPDHPWFVGVQFHPEFKSKPLAPHPLFVHFVKASLKKK >Mature_534_residues MKQKFIFVTGGVVSSIGKGLTAASLGALLEGRGHKVTIMKFDPYLNVDPGTMSPLQHGEVYVTEDGAETDLDLGHYERFT SALMNRSNSVSTGQIYDTVLNRERRGDYLGGTVQVIPHITEEIKARIYEAAQGSEIILVEIGGTVGDIESQPFLEAIRQM RIDVGQENSVLVHVTYVPYIAAAGELKSKPTQHSVKELREIGLQPDFLVCRSEKVIDDNLKAKIGLFCSVKPENVIAAQD SRFIYEVPLALHREKLDELIVARLGLSAGKLNMKGWQNLVKILGNPSHTVKIGVVGKYVDLKESYKSLHEALVHGGVANN ARVEIIYVDSEKVTDKTVHSLLGKVDGILVPGGFGTRGVEGKITAIKYAREKRVPFFGICFGMQLSAIEFARNVCGIKDA TSREFHAENKRTGNFVIDSMAEQRGVINKGGTMRLGAFPCAIASGSRAYQVYKASSIMERHRHRFEFNNKYKDLFEKNGM MASGICKERDLVEIVELPDHPWFVGVQFHPEFKSKPLAPHPLFVHFVKASLKKK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI28559085, Length=551, Percent_Identity=44.6460980036298, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI28559083, Length=551, Percent_Identity=44.6460980036298, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI221316689, Length=551, Percent_Identity=44.6460980036298, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI148491070, Length=554, Percent_Identity=44.5848375451264, Blast_Score=460, Evalue=1e-129, Organism=Escherichia coli, GI1789142, Length=537, Percent_Identity=53.4450651769088, Blast_Score=575, Evalue=1e-165, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=37.6026272577997, Blast_Score=410, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6322563, Length=563, Percent_Identity=42.6287744227353, Blast_Score=446, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6319432, Length=562, Percent_Identity=41.4590747330961, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI24664469, Length=553, Percent_Identity=45.2079566003617, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=499, Percent_Identity=44.2885771543086, Blast_Score=402, Evalue=1e-112,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_BDEBA (Q6MPP0)
Other databases:
- EMBL: BX842648 - RefSeq: NP_967764.2 - HSSP: P17812 - ProteinModelPortal: Q6MPP0 - SMR: Q6MPP0 - GeneID: 2734036 - GenomeReviews: BX842601_GR - KEGG: bba:Bd0808 - NMPDR: fig|264462.1.peg.734 - HOGENOM: HBG597806 - PhylomeDB: Q6MPP0 - ProtClustDB: PRK05380 - BioCyc: BBAC264462:BD0808-MONOMER - BRENDA: 6.3.4.2 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59099; Mature: 59099
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 380-380 ACT_SITE 509-509 ACT_SITE 511-511
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKFIFVTGGVVSSIGKGLTAASLGALLEGRGHKVTIMKFDPYLNVDPGTMSPLQHGEV CCCEEEEEECHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCCEE YVTEDGAETDLDLGHYERFTSALMNRSNSVSTGQIYDTVLNRERRGDYLGGTVQVIPHIT EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEHHHHH EEIKARIYEAAQGSEIILVEIGGTVGDIESQPFLEAIRQMRIDVGQENSVLVHVTYVPYI HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHH AAAGELKSKPTQHSVKELREIGLQPDFLVCRSEKVIDDNLKAKIGLFCSVKPENVIAAQD HHCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEECC SRFIYEVPLALHREKLDELIVARLGLSAGKLNMKGWQNLVKILGNPSHTVKIGVVGKYVD CCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEC LKESYKSLHEALVHGGVANNARVEIIYVDSEKVTDKTVHSLLGKVDGILVPGGFGTRGVE HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCC GKITAIKYAREKRVPFFGICFGMQLSAIEFARNVCGIKDATSREFHAENKRTGNFVIDSM CEEEEEEEHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHH AEQRGVINKGGTMRLGAFPCAIASGSRAYQVYKASSIMERHRHRFEFNNKYKDLFEKNGM HHHCCCCCCCCCEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCC MASGICKERDLVEIVELPDHPWFVGVQFHPEFKSKPLAPHPLFVHFVKASLKKK EEECCCCCCCHHHHEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKQKFIFVTGGVVSSIGKGLTAASLGALLEGRGHKVTIMKFDPYLNVDPGTMSPLQHGEV CCCEEEEEECHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCCEE YVTEDGAETDLDLGHYERFTSALMNRSNSVSTGQIYDTVLNRERRGDYLGGTVQVIPHIT EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEHHHHH EEIKARIYEAAQGSEIILVEIGGTVGDIESQPFLEAIRQMRIDVGQENSVLVHVTYVPYI HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHH AAAGELKSKPTQHSVKELREIGLQPDFLVCRSEKVIDDNLKAKIGLFCSVKPENVIAAQD HHCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEECC SRFIYEVPLALHREKLDELIVARLGLSAGKLNMKGWQNLVKILGNPSHTVKIGVVGKYVD CCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEC LKESYKSLHEALVHGGVANNARVEIIYVDSEKVTDKTVHSLLGKVDGILVPGGFGTRGVE HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCC GKITAIKYAREKRVPFFGICFGMQLSAIEFARNVCGIKDATSREFHAENKRTGNFVIDSM CEEEEEEEHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHH AEQRGVINKGGTMRLGAFPCAIASGSRAYQVYKASSIMERHRHRFEFNNKYKDLFEKNGM HHHCCCCCCCCCEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCC MASGICKERDLVEIVELPDHPWFVGVQFHPEFKSKPLAPHPLFVHFVKASLKKK EEECCCCCCCHHHHEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA