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The map label for this gene is rpl19e [H]

Identifier: 227827709

GI number: 227827709

Start: 1348883

End: 1349341

Strand: Direct

Name: rpl19e [H]

Synonym: M1425_1438

Alternate gene names: 227827709

Gene position: 1348883-1349341 (Clockwise)

Preceding gene: 227827708

Following gene: 227827710

Centisome position: 51.7

GC content: 37.69

Gene sequence:

>459_bases
ATGACTAACTTGAAAGCTCAAAAAAGGCTAGCAGCATCGGTTGCAGGGGTAGGAATAAGCAGAGTTAAGATTGTTGAGGA
TTATATTGAGGACGTTCAAAGCGCACTAACCAGAGAAGAAATTAGGAATTTGATAAAGGATGGTAAGATTATAATCCTTA
AAAAGGTTGGAATAAGCGACGGTAGATTAAAGGAGAGAAGAAAAAAGAAGAGCCTTAAGAGTGAAGGGAAAAAGGCAGGA
AGTAGAAAAGGCAAGAAGGGAGCAAGGGCAAATAGCAAACGAATGTGGGTTAAGAGGATAAGAAAAATAAGGGCTTATCT
TAAATGGTTGAGAGATCATAAGGTTATTGATAGTCATACTTATAGGGAATTATACTTAAAAGCCAAGGGTGGCAACTATA
AGGGAGTTTCAGATGTTAGGAACGTCTTAATACAGATGGGGAAATTAAGAGGTGAGTAA

Upstream 100 bases:

>100_bases
TTGTAACAATAGCTTCTTCAGTTGGTTTTAAAAAGAGGCTTGAAATTCTAAATAAAGCTAGGGAATTGGGTTTGAAGGTA
AGTAATGAGGGTGTCAGTGC

Downstream 100 bases:

>100_bases
ATTTGGCCAATGGTCCTAATTATAAGATAAAACCTAGGAGAAGAAGAGAAGGAAAAACTAACTACTATAAGAGATATGTT
TATGTCATAAGTAAACAAAT

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTNLKAQKRLAASVAGVGISRVKIVEDYIEDVQSALTREEIRNLIKDGKIIILKKVGISDGRLKERRKKKSLKSEGKKAG
SRKGKKGARANSKRMWVKRIRKIRAYLKWLRDHKVIDSHTYRELYLKAKGGNYKGVSDVRNVLIQMGKLRGE

Sequences:

>Translated_152_residues
MTNLKAQKRLAASVAGVGISRVKIVEDYIEDVQSALTREEIRNLIKDGKIIILKKVGISDGRLKERRKKKSLKSEGKKAG
SRKGKKGARANSKRMWVKRIRKIRAYLKWLRDHKVIDSHTYRELYLKAKGGNYKGVSDVRNVLIQMGKLRGE
>Mature_151_residues
TNLKAQKRLAASVAGVGISRVKIVEDYIEDVQSALTREEIRNLIKDGKIIILKKVGISDGRLKERRKKKSLKSEGKKAGS
RKGKKGARANSKRMWVKRIRKIRAYLKWLRDHKVIDSHTYRELYLKAKGGNYKGVSDVRNVLIQMGKLRGE

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17508673, Length=130, Percent_Identity=36.9230769230769, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319559, Length=136, Percent_Identity=38.9705882352941, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319444, Length=136, Percent_Identity=38.9705882352941, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552831, Length=137, Percent_Identity=39.4160583941606, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI17136322, Length=137, Percent_Identity=39.4160583941606, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17372; Mature: 17241

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLKAQKRLAASVAGVGISRVKIVEDYIEDVQSALTREEIRNLIKDGKIIILKKVGISD
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
GRLKERRKKKSLKSEGKKAGSRKGKKGARANSKRMWVKRIRKIRAYLKWLRDHKVIDSHT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YRELYLKAKGGNYKGVSDVRNVLIQMGKLRGE
HHHHEEEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNLKAQKRLAASVAGVGISRVKIVEDYIEDVQSALTREEIRNLIKDGKIIILKKVGISD
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
GRLKERRKKKSLKSEGKKAGSRKGKKGARANSKRMWVKRIRKIRAYLKWLRDHKVIDSHT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YRELYLKAKGGNYKGVSDVRNVLIQMGKLRGE
HHHHEEEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726 [H]