| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is rpl32e
Identifier: 227827708
GI number: 227827708
Start: 1348470
End: 1348886
Strand: Direct
Name: rpl32e
Synonym: M1425_1437
Alternate gene names: 227827708
Gene position: 1348470-1348886 (Clockwise)
Preceding gene: 227827707
Following gene: 227827709
Centisome position: 51.69
GC content: 35.25
Gene sequence:
>417_bases ATGACCGAAGAAAAAATACAGTCATATAGGAAAAAGATTTATGTAATAAGGCAAAAGCTTAAGGCAAAGAAGCCAAGGTT CTTACGTTATGATTCCGACAAGTTCTTCAGATTAGGAAGACAGGAAAAATGGAGAAGACCCTACGGAAGAGATAATAAGA CTAGATTAAAAGTTAGGGGATTTCCTGCTATAGTAAGTGTTGGTTACAGACTGCCTAAAGAAGTTAGGGGATTTCATCCA AGTGGATTAAGGCAAGTTATAGTTCATAATGTTAACGATCTAGTTAAAGTGCAAAATCAAAAAGACAGTGTTATTGTAAC AATAGCTTCTTCAGTTGGTTTTAAAAAGAGGCTTGAAATTCTAAATAAAGCTAGGGAATTGGGTTTGAAGGTAAGTAATG AGGGTGTCAGTGCATGA
Upstream 100 bases:
>100_bases CCCAAACTGCAGCAAATATTGAAGCAGCTTCAAAGATAACTGGTTTTGATAGACGTATCTTCTCGGATGGAATTTTCATC TATAAAAAAGAGGTGGTTGA
Downstream 100 bases:
>100_bases CTAACTTGAAAGCTCAAAAAAGGCTAGCAGCATCGGTTGCAGGGGTAGGAATAAGCAGAGTTAAGATTGTTGAGGATTAT ATTGAGGACGTTCAAAGCGC
Product: 50S ribosomal protein L32e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTEEKIQSYRKKIYVIRQKLKAKKPRFLRYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHP SGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNEGVSA
Sequences:
>Translated_138_residues MTEEKIQSYRKKIYVIRQKLKAKKPRFLRYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHP SGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNEGVSA >Mature_137_residues TEEKIQSYRKKIYVIRQKLKAKKPRFLRYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPS GLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNEGVSA
Specific function: Unknown
COG id: COG1717
COG function: function code J; Ribosomal protein L32E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L32e family
Homologues:
Organism=Homo sapiens, GI4506635, Length=114, Percent_Identity=32.4561403508772, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI55743130, Length=114, Percent_Identity=32.4561403508772, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI55743128, Length=114, Percent_Identity=32.4561403508772, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319378, Length=108, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651273, Length=126, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI221460572, Length=126, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI221460569, Length=126, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864106, Length=126, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24651276, Length=126, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL32_SULIA (C3N5U4)
Other databases:
- EMBL: CP001401 - RefSeq: YP_002843414.1 - GeneID: 7814253 - GenomeReviews: CP001401_GR - KEGG: sim:M1627_1487 - OMA: FKGQYLM - ProtClustDB: PRK08562 - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00810 - InterPro: IPR001515 - InterPro: IPR018263 - PANTHER: PTHR23413:SF1 - ProDom: PD003823
Pfam domain/function: PF01655 Ribosomal_L32e; SSF52042 Ribosomal_L32e
EC number: NA
Molecular weight: Translated: 16126; Mature: 15995
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: PS00580 RIBOSOMAL_L32E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEKIQSYRKKIYVIRQKLKAKKPRFLRYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRG CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCHHHHCCCCCCCCCCEEEECC FPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEI CHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH LNKARELGLKVSNEGVSA HHHHHHCCCEECCCCCCC >Mature Secondary Structure TEEKIQSYRKKIYVIRQKLKAKKPRFLRYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRG CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCHHHHCCCCCCCCCCEEEECC FPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEI CHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH LNKARELGLKVSNEGVSA HHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA