Click here to switch to the map view.

The map label for this gene is benE [H]

Identifier: 227082097

GI number: 227082097

Start: 2057682

End: 2058845

Strand: Direct

Name: benE [H]

Synonym: VCM66_1894

Alternate gene names: 227082097

Gene position: 2057682-2058845 (Clockwise)

Preceding gene: 227082094

Following gene: 227082104

Centisome position: 71.14

GC content: 51.72

Gene sequence:

>1164_bases
ATGATGAAAGGATTCTTCAATCTTAGTCACCTCTCTGCGGGATTTACCACGGTTTTGGTGGGATACACCAGTTCGGTGGT
GATCGTGATCCAAGCCGCCACAGCCTCAGGTGCCAATCCAACTCAAATCGAAAGTTGGTTGCTGACTCTAGGCGTGGTGA
TGGGGCTAACGTCAATCCTCTACTCTTGGTTTTACAAAACGCCAATTGTCACGGCGTGGTCAACACCTGCGGCAGTCATG
CTGGCGGCATCGGCGGGACAATATTCATTACCCGTGGTGATTGGCGCGTTTATGTTCTCTGGCGCACTGTTTACTTTGAC
GGGCATGCTCGCACCTTTGACACGAGCACTGAGTAAAATCCCAGTTCCTCTAGGTACGGCTATGCTTGGTGCTATTTTGC
TGCCCTTTTGTGCCAAAGCCTTCACCCCGCTGACCGATACTCCCGCACTCTTTGCGCTTTTATTTACTAGCTACTTACTG
GCTAAGCACCTTGTTCCTCGATACACCATGTTGGTGCTCTTGCTGGTCAGTCTTGGCAGTGCTCTCGCCTTGGGAAGCTT
TCAGCATGCGGATCTGGCGCTGCGGATCGCCACGCCAATCTGGGTAATGCCGGAGTTTGATTGGCTCGCCATACTCAACC
TTGCCCTGCCACTCTACCTCATCACCATGCTTTCACAAAATTTACCGGGTATTGCGATGCTCAAAAGCTATCAGTATGAC
GCACCAATCAAACCGATTTTGGTGGGCACGGGATTAGCGACCCTGATGAGCGCGCCTTTTGGCGGCTTTAGCGTCAACTT
AGCCGCCATTTCTGCCGCCATCTGTATGAATGAGGATGTCGATCAAGACAAAGCACAACGCTACCGTGCGGTACTTTGGG
CTGGAGGATTTTATTTATTGGCAGGGATTTTTGCGGCCCTTGTCGTCAATCTCTTCCTCGCGCTACCCAAACCTATTTCA
GCCATGCTCGCTGGTTTAGCGCTGCTCGGTACATTGATGATGTGTTTGCAGAGCGCGTTTAAAATCGATGAGTACCGCGA
GCCTGCGCTACTCACTTTTGTGATCACGCTTTCTGGTGCCACCTTGTTTGGAATGAGCGCGACGCTGATTGGCCTTGTGA
TCGGATTGGCGTACTTACGGTTGACGACTCGCCCGCGACCATAA

Upstream 100 bases:

>100_bases
TCACGTCAGTCATGCGAAAACCCCTTATTGTGCGCTATAACGCACAGAGCTATACTCGGAACGTGCGCTATTACGCACGA
CTTTACCTGAAAAGGAAATC

Downstream 100 bases:

>100_bases
ACTCACCCAGCAGCGGATAGGTTTAATCTTATAGCGGAGTGAACTGCGTTTGGTTGGCGGCCAACCACGCTTTCACCGCC
GCACGAGAGACTTTAATTCC

Product: benzoate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MMKGFFNLSHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFYKTPIVTAWSTPAAVM
LAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLGTAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLL
AKHLVPRYTMLVLLLVSLGSALALGSFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYD
APIKPILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFAALVVNLFLALPKPIS
AMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGMSATLIGLVIGLAYLRLTTRPRP

Sequences:

>Translated_387_residues
MMKGFFNLSHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFYKTPIVTAWSTPAAVM
LAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLGTAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLL
AKHLVPRYTMLVLLLVSLGSALALGSFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYD
APIKPILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFAALVVNLFLALPKPIS
AMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGMSATLIGLVIGLAYLRLTTRPRP
>Mature_387_residues
MMKGFFNLSHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFYKTPIVTAWSTPAAVM
LAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLGTAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLL
AKHLVPRYTMLVLLLVSLGSALALGSFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYD
APIKPILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFAALVVNLFLALPKPIS
AMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGMSATLIGLVIGLAYLRLTTRPRP

Specific function: Unknown

COG id: COG3135

COG function: function code Q; Uncharacterized protein involved in benzoate metabolism

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081909, Length=363, Percent_Identity=39.3939393939394, Blast_Score=248, Evalue=5e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004711 [H]

Pfam domain/function: PF03594 BenE [H]

EC number: NA

Molecular weight: Translated: 41232; Mature: 41232

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKGFFNLSHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSIL
CCCCCCCHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
YSWFYKTPIVTAWSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKI
HHHHHHCCCEEECCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVPLGTAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGS
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALGSFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYD
HHHHCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
APIKPILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLL
CCCCCEEECCCHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHH
AGIFAALVVNLFLALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHCCC
TLFGMSATLIGLVIGLAYLRLTTRPRP
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMKGFFNLSHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSIL
CCCCCCCHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
YSWFYKTPIVTAWSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKI
HHHHHHCCCEEECCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVPLGTAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGS
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALGSFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYD
HHHHCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
APIKPILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLL
CCCCCEEECCCHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHH
AGIFAALVVNLFLALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHCCC
TLFGMSATLIGLVIGLAYLRLTTRPRP
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]