| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is nanK
Identifier: 227081927
GI number: 227081927
Start: 1878016
End: 1878879
Strand: Direct
Name: nanK
Synonym: VCM66_1720
Alternate gene names: 227081927
Gene position: 1878016-1878879 (Clockwise)
Preceding gene: 227081926
Following gene: 227081928
Centisome position: 64.93
GC content: 45.02
Gene sequence:
>864_bases ATGCGCACACTAGCCATCGATATCGGCGGAACAAAAATAGCATTAGCGATTGTAGAAGAAGGTACGATCATACAGCGTTA CCAGATAGCAACGCCTGTGGTGCAGGACGTCACCAAGTTTGTTCAAGCGATTCTCGAAAAGGTCACTGAATGGCTCCCTT CTATCGATTATGTAGGCGTATCAACAACAGGTTATGTAACGCCAGAAGGCATCACATCGATAAATCCAGAGACTCTTAAT TTCCCTGTACCTTTTCCATTAGCTCAAACGCTAGAACAACTCACTAATAAACCAGTCTCCATTCTTAATGATGCACAGGC CGCGGCATGGTTTGAATTTGTGCAGTTAAAAAATCCTAGCTTAAATATGGCTTTTATTACGGTTTCAACAGGGGTTGGTG GCGGAATCATCATTGATGGCAAGCTTCACAAAGGAAACAGCGGTTTAGCGGGACACATAGGTCACATGTCGGTGGCCATT GAAGGTCCATTATGCGGATGTGGTCAGCGAGGTTGTGTTGAGTCCATGGCTTCAGGTAACGCGATTCAAAAAGAGAGCGA AGCCACTTTTACCGAGACAATGAGCAATGTTGAGTTATTTAAGCAAGCAGCGTTCAACCCGAAAGCAGAAGCGATCATCA ATCGCAGTGTGCAAGCAGTAGCCACATTATGCTGTAATCTTAAAGCATGCTTAGATCTGGATATTATTGTTTTGGGTGGT GGAATTGGTCTCGCAGAGGGCTACCTTGAACGCCTCAACAAAGCTATTCAATCTAGGCCATCCGTATTTCACATCCCTGT CACTCCTGCTCATGGCGATTATGATGCTTGCCTACTCGGAGCAGCATTTCAGTTTAAGGAGTAA
Upstream 100 bases:
>100_bases AGTCTGGTGCGGTTGCCGTAACGGTTGGTTCTGCATTGACTCGATTAGAAGTGGTTACTCAATGGTTCAATAACGCAACC CAAGCTGCGGGAGAAAGGAA
Downstream 100 bases:
>100_bases ACGATGGCATTAAAGGCAATTTCAGCCACACGGCTTTTTGATGGAATTCAGTATTACGAGAATGCGGCAATGGTTTGGGA AGGTTCACACATTCACTCCA
Product: N-acetylmannosamine kinase
Products: NA
Alternate protein names: ManNAc kinase; N-acetyl-D-mannosamine kinase
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MRTLAIDIGGTKIALAIVEEGTIIQRYQIATPVVQDVTKFVQAILEKVTEWLPSIDYVGVSTTGYVTPEGITSINPETLN FPVPFPLAQTLEQLTNKPVSILNDAQAAAWFEFVQLKNPSLNMAFITVSTGVGGGIIIDGKLHKGNSGLAGHIGHMSVAI EGPLCGCGQRGCVESMASGNAIQKESEATFTETMSNVELFKQAAFNPKAEAIINRSVQAVATLCCNLKACLDLDIIVLGG GIGLAEGYLERLNKAIQSRPSVFHIPVTPAHGDYDACLLGAAFQFKE
Sequences:
>Translated_287_residues MRTLAIDIGGTKIALAIVEEGTIIQRYQIATPVVQDVTKFVQAILEKVTEWLPSIDYVGVSTTGYVTPEGITSINPETLN FPVPFPLAQTLEQLTNKPVSILNDAQAAAWFEFVQLKNPSLNMAFITVSTGVGGGIIIDGKLHKGNSGLAGHIGHMSVAI EGPLCGCGQRGCVESMASGNAIQKESEATFTETMSNVELFKQAAFNPKAEAIINRSVQAVATLCCNLKACLDLDIIVLGG GIGLAEGYLERLNKAIQSRPSVFHIPVTPAHGDYDACLLGAAFQFKE >Mature_287_residues MRTLAIDIGGTKIALAIVEEGTIIQRYQIATPVVQDVTKFVQAILEKVTEWLPSIDYVGVSTTGYVTPEGITSINPETLN FPVPFPLAQTLEQLTNKPVSILNDAQAAAWFEFVQLKNPSLNMAFITVSTGVGGGIIIDGKLHKGNSGLAGHIGHMSVAI EGPLCGCGQRGCVESMASGNAIQKESEATFTETMSNVELFKQAAFNPKAEAIINRSVQAVATLCCNLKACLDLDIIVLGG GIGLAEGYLERLNKAIQSRPSVFHIPVTPAHGDYDACLLGAAFQFKE
Specific function: Catalyzes the phosphorylation of N-acetylmannosamine (ManNAc) to ManNAc-6-P
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family. NanK subfamily
Homologues:
Organism=Homo sapiens, GI298566325, Length=287, Percent_Identity=31.0104529616725, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI298566315, Length=287, Percent_Identity=31.0104529616725, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI4885285, Length=287, Percent_Identity=31.0104529616725, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI190014632, Length=287, Percent_Identity=31.0104529616725, Blast_Score=83, Evalue=3e-16, Organism=Escherichia coli, GI87082230, Length=276, Percent_Identity=40.2173913043478, Blast_Score=185, Evalue=2e-48, Organism=Escherichia coli, GI1787363, Length=262, Percent_Identity=30.5343511450382, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI87081733, Length=309, Percent_Identity=25.5663430420712, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790522, Length=158, Percent_Identity=27.8481012658228, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87082127, Length=238, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787878, Length=169, Percent_Identity=27.2189349112426, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NANK_VIBC3 (A5F7C0)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F7C0 - STRING: A5F7C0 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A1379 - eggNOG: COG1940 - HOGENOM: HBG730260 - OMA: GVASNIP - ProtClustDB: PRK05082 - BioCyc: VCHO345073:VC0395_A1379-MONOMER - HAMAP: MF_01234 - InterPro: IPR000600
Pfam domain/function: PF00480 ROK
EC number: =2.7.1.60
Molecular weight: Translated: 30519; Mature: 30519
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLAIDIGGTKIALAIVEEGTIIQRYQIATPVVQDVTKFVQAILEKVTEWLPSIDYVGV CEEEEEEECCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC STTGYVTPEGITSINPETLNFPVPFPLAQTLEQLTNKPVSILNDAQAAAWFEFVQLKNPS CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCC LNMAFITVSTGVGGGIIIDGKLHKGNSGLAGHIGHMSVAIEGPLCGCGQRGCVESMASGN CEEEEEEEECCCCCCEEEECEEECCCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHCCC AIQKESEATFTETMSNVELFKQAAFNPKAEAIINRSVQAVATLCCNLKACLDLDIIVLGG CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEEC GIGLAEGYLERLNKAIQSRPSVFHIPVTPAHGDYDACLLGAAFQFKE CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCHHCCCC >Mature Secondary Structure MRTLAIDIGGTKIALAIVEEGTIIQRYQIATPVVQDVTKFVQAILEKVTEWLPSIDYVGV CEEEEEEECCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC STTGYVTPEGITSINPETLNFPVPFPLAQTLEQLTNKPVSILNDAQAAAWFEFVQLKNPS CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCC LNMAFITVSTGVGGGIIIDGKLHKGNSGLAGHIGHMSVAIEGPLCGCGQRGCVESMASGN CEEEEEEEECCCCCCEEEECEEECCCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHCCC AIQKESEATFTETMSNVELFKQAAFNPKAEAIINRSVQAVATLCCNLKACLDLDIIVLGG CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEEC GIGLAEGYLERLNKAIQSRPSVFHIPVTPAHGDYDACLLGAAFQFKE CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA