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The map label for this gene is sxy [H]

Identifier: 227081871

GI number: 227081871

Start: 1808024

End: 1808611

Strand: Direct

Name: sxy [H]

Synonym: VCM66_1662

Alternate gene names: 227081871

Gene position: 1808024-1808611 (Clockwise)

Preceding gene: 227081870

Following gene: 227081872

Centisome position: 62.51

GC content: 45.07

Gene sequence:

>588_bases
ATGGATAAACCAGTATTAAAAGATTCAATGCGGCTCTTTGAGCAGCTAGGACGTGTTAAATCTCGTTCAATGTTTGGTGG
CTTTGGTATTTTCGTCGACGAAACTATGTTTGCGCTTGTGGTTAACGATACGCTGCACATCCGTGCAGATGACGCCACAA
TCGAAAAGTATAAACAGCAAGGTTATGAACCTTATGTTTACAAAAAACGTGGCTTCCCCGTTGTAACTAAGTACTACGCT
CTACCTGAAGATTGTTGGAGTCATCCAGACTCTATCCTCAATGAAGCGCGTGCAGCACTGGAGGTCGCTAAGGCCGAACG
TGAAACTCAAGCACAAGCGAAACCTGATCGTTTGAAAGATCTTCCTAACTTGCGTTTAGCAACAGAAAGAATGCTCAAAA
AAGCAGGTATCGACACCGTCGAGTCTCTTCAGACTCTTGGTTCTGTCGAAGCTTATAAAGCGGTTCAACGAACCCACACG
GCAGAGGTGAGTTTAGAGTTGCTATGGGCTCTAGAAGGCGCAATCGAAGGTAAACATTGGTCGGTGATCCCACAAAATCG
TCGTGATGAGCTATTAAGGCATCTCTGA

Upstream 100 bases:

>100_bases
CACTTTGTTGACTCATCATTGACACTATGAATGCATGCTTTTGCTAATTTTCTCGGACCTGACTTGGTGGCGTATGTAAC
AATACTCCGAGACTAACAGC

Downstream 100 bases:

>100_bases
GTTTCATTTTGAGTTCATCAACGCCTGTAATCATCCTGTGTTTTTACACACCCTATATTTCATAACGCGTCCAAAGTGGC
GCGTTATTTTTTTGAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MDKPVLKDSMRLFEQLGRVKSRSMFGGFGIFVDETMFALVVNDTLHIRADDATIEKYKQQGYEPYVYKKRGFPVVTKYYA
LPEDCWSHPDSILNEARAALEVAKAERETQAQAKPDRLKDLPNLRLATERMLKKAGIDTVESLQTLGSVEAYKAVQRTHT
AEVSLELLWALEGAIEGKHWSVIPQNRRDELLRHL

Sequences:

>Translated_195_residues
MDKPVLKDSMRLFEQLGRVKSRSMFGGFGIFVDETMFALVVNDTLHIRADDATIEKYKQQGYEPYVYKKRGFPVVTKYYA
LPEDCWSHPDSILNEARAALEVAKAERETQAQAKPDRLKDLPNLRLATERMLKKAGIDTVESLQTLGSVEAYKAVQRTHT
AEVSLELLWALEGAIEGKHWSVIPQNRRDELLRHL
>Mature_195_residues
MDKPVLKDSMRLFEQLGRVKSRSMFGGFGIFVDETMFALVVNDTLHIRADDATIEKYKQQGYEPYVYKKRGFPVVTKYYA
LPEDCWSHPDSILNEARAALEVAKAERETQAQAKPDRLKDLPNLRLATERMLKKAGIDTVESLQTLGSVEAYKAVQRTHT
AEVSLELLWALEGAIEGKHWSVIPQNRRDELLRHL

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=176, Percent_Identity=32.9545454545455, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 22305; Mature: 22305

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPVLKDSMRLFEQLGRVKSRSMFGGFGIFVDETMFALVVNDTLHIRADDATIEKYKQQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEEEEEECHHHHHHHHHC
GYEPYVYKKRGFPVVTKYYALPEDCWSHPDSILNEARAALEVAKAERETQAQAKPDRLKD
CCCCEEEECCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
LPNLRLATERMLKKAGIDTVESLQTLGSVEAYKAVQRTHTAEVSLELLWALEGAIEGKHW
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
SVIPQNRRDELLRHL
ECCCCCHHHHHHHCC
>Mature Secondary Structure
MDKPVLKDSMRLFEQLGRVKSRSMFGGFGIFVDETMFALVVNDTLHIRADDATIEKYKQQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEEEEEECHHHHHHHHHC
GYEPYVYKKRGFPVVTKYYALPEDCWSHPDSILNEARAALEVAKAERETQAQAKPDRLKD
CCCCEEEECCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
LPNLRLATERMLKKAGIDTVESLQTLGSVEAYKAVQRTHTAEVSLELLWALEGAIEGKHW
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
SVIPQNRRDELLRHL
ECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]