| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081517
Identifier: 227081517
GI number: 227081517
Start: 1391148
End: 1392167
Strand: Direct
Name: 227081517
Synonym: VCM66_1301
Alternate gene names: NA
Gene position: 1391148-1392167 (Clockwise)
Preceding gene: 227081516
Following gene: 227081518
Centisome position: 48.09
GC content: 51.47
Gene sequence:
>1020_bases ATGAAATTAGCGACTCTGAAAAATGGAATGCGTGATGGTCAACTGGTGGTGGTGAGCCGAGATTTAACCCTGTGTGTTGC AGTACCTGACATTGCCAGTACATTACAGCAGGCGTTGGATAACTGGGACTCGGTGGTGGACTCGCTGCAAGATGTCTATT TCGCACTTAATGAACGCACGATTACCGCGCGTTTGTTTGATGCTGAACACTGTCTATCGCCATTACCTCGAGCCTATCAT TGGGCGGATGGTTCCGCTTACGTTAACCATGTTGAATTGGTGCGCAAAGCGCGTGGCGCAGAAATGCCCGCCAGTTTCTG GACCGATCCTCTGATGTATCAAGGGGGATCAGATACGTTTTTAGCCCCGCGGAGTCCGATCCTGATGGCGGATGAAGCGT GGGGGATCGATTTTGAAGCAGAAGTGGCGGTGGTAACTGCTGATGTGGCGATGGGAAGCTCAGTGCAAGAAGCGGAGCAG GCCATTCGGCTACTGATGCTGGTCAATGATGTGTCACTGCGTGGCTTGATCCCGAATGAGCTTGCGAAAGGGTTTGGTTT CTATCAATCCAAACCTTCTTCGGCTTTTTCACCTGTCGCGGTGACTCCAGATGAGCTTGGTGAGGCGTGGGATGGCGCGC GCCTTGCCCTGCCATTACGTACCACCTATAACCACGAACTGTTTGGCTGTCCCAATGCCGGCGTGGATATGACTTTTTCA TTCCCAGAGTTAATCGCTCATGCAGCGAAAACACGAGCACTGTGTGCGGGCTCGATCATAGGGTCGGGCACCGTTTCCAA TAAGCAGGGAACCGATTATGGTAGTGCAATCCGTGAAGGTGGCGTAGGGTATTCATGCATTGCTGAGCTGCGAATGATAG AAACGCTGCGTGATGGTGAGCCTAAAACAGCCTTCATGCGCTTTGGTGATACGGTGCGAATTGAGATGCTCAATCCACAG CAACAGAGTATTTTTGGTGCGATTGAGCAACAGGTGATGCAGTACAACAAGGAAGTGTGA
Upstream 100 bases:
>100_bases GATTGATACCCGCCATGCGCTACAGTTTAGTGACGCAGCGCAGCAGGTGGAAAATCGTCAGTATGTTTACAGTTGGCAGA GCAAAGTGGAGTAGGGCGAT
Downstream 100 bases:
>100_bases TGAGTTTAATTCTCTATGGTTATTGGCGTTCGTCAGCCGCCTATCGAGTGCGTATTGCCCTCAATATTAAACAGTTGGTT TACGAGTCCCGTGCCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKLATLKNGMRDGQLVVVSRDLTLCVAVPDIASTLQQALDNWDSVVDSLQDVYFALNERTITARLFDAEHCLSPLPRAYH WADGSAYVNHVELVRKARGAEMPASFWTDPLMYQGGSDTFLAPRSPILMADEAWGIDFEAEVAVVTADVAMGSSVQEAEQ AIRLLMLVNDVSLRGLIPNELAKGFGFYQSKPSSAFSPVAVTPDELGEAWDGARLALPLRTTYNHELFGCPNAGVDMTFS FPELIAHAAKTRALCAGSIIGSGTVSNKQGTDYGSAIREGGVGYSCIAELRMIETLRDGEPKTAFMRFGDTVRIEMLNPQ QQSIFGAIEQQVMQYNKEV
Sequences:
>Translated_339_residues MKLATLKNGMRDGQLVVVSRDLTLCVAVPDIASTLQQALDNWDSVVDSLQDVYFALNERTITARLFDAEHCLSPLPRAYH WADGSAYVNHVELVRKARGAEMPASFWTDPLMYQGGSDTFLAPRSPILMADEAWGIDFEAEVAVVTADVAMGSSVQEAEQ AIRLLMLVNDVSLRGLIPNELAKGFGFYQSKPSSAFSPVAVTPDELGEAWDGARLALPLRTTYNHELFGCPNAGVDMTFS FPELIAHAAKTRALCAGSIIGSGTVSNKQGTDYGSAIREGGVGYSCIAELRMIETLRDGEPKTAFMRFGDTVRIEMLNPQ QQSIFGAIEQQVMQYNKEV >Mature_339_residues MKLATLKNGMRDGQLVVVSRDLTLCVAVPDIASTLQQALDNWDSVVDSLQDVYFALNERTITARLFDAEHCLSPLPRAYH WADGSAYVNHVELVRKARGAEMPASFWTDPLMYQGGSDTFLAPRSPILMADEAWGIDFEAEVAVVTADVAMGSSVQEAEQ AIRLLMLVNDVSLRGLIPNELAKGFGFYQSKPSSAFSPVAVTPDELGEAWDGARLALPLRTTYNHELFGCPNAGVDMTFS FPELIAHAAKTRALCAGSIIGSGTVSNKQGTDYGSAIREGGVGYSCIAELRMIETLRDGEPKTAFMRFGDTVRIEMLNPQ QQSIFGAIEQQVMQYNKEV
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36981; Mature: 36981
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLATLKNGMRDGQLVVVSRDLTLCVAVPDIASTLQQALDNWDSVVDSLQDVYFALNERT CCCCHHHCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ITARLFDAEHCLSPLPRAYHWADGSAYVNHVELVRKARGAEMPASFWTDPLMYQGGSDTF EEEEEECHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCCCE LAPRSPILMADEAWGIDFEAEVAVVTADVAMGSSVQEAEQAIRLLMLVNDVSLRGLIPNE ECCCCCEEEECCCCCCCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LAKGFGFYQSKPSSAFSPVAVTPDELGEAWDGARLALPLRTTYNHELFGCPNAGVDMTFS HHHHCCCCCCCCCCCCCCEEECHHHHHCCCCCCEEEEEEECCCCCCEEECCCCCCCEEEC FPELIAHAAKTRALCAGSIIGSGTVSNKQGTDYGSAIREGGVGYSCIAELRMIETLRDGE HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC PKTAFMRFGDTVRIEMLNPQQQSIFGAIEQQVMQYNKEV CCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLATLKNGMRDGQLVVVSRDLTLCVAVPDIASTLQQALDNWDSVVDSLQDVYFALNERT CCCCHHHCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ITARLFDAEHCLSPLPRAYHWADGSAYVNHVELVRKARGAEMPASFWTDPLMYQGGSDTF EEEEEECHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCCCE LAPRSPILMADEAWGIDFEAEVAVVTADVAMGSSVQEAEQAIRLLMLVNDVSLRGLIPNE ECCCCCEEEECCCCCCCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LAKGFGFYQSKPSSAFSPVAVTPDELGEAWDGARLALPLRTTYNHELFGCPNAGVDMTFS HHHHCCCCCCCCCCCCCCEEECHHHHHCCCCCCEEEEEEECCCCCCEEECCCCCCCEEEC FPELIAHAAKTRALCAGSIIGSGTVSNKQGTDYGSAIREGGVGYSCIAELRMIETLRDGE HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC PKTAFMRFGDTVRIEMLNPQQQSIFGAIEQQVMQYNKEV CCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA