| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is celA [H]
Identifier: 227081453
GI number: 227081453
Start: 1314364
End: 1314669
Strand: Direct
Name: celA [H]
Synonym: VCM66_1236
Alternate gene names: 227081453
Gene position: 1314364-1314669 (Clockwise)
Preceding gene: 227081451
Following gene: 227081454
Centisome position: 45.44
GC content: 40.85
Gene sequence:
>306_bases ATGAAAAAGATCCTACTCTGCTGTAGTGCTGGTATGTCTACCAGTATGTTAGTGAAGAAAATGCAGCAAGCTGCTGAAAG TAAAGGCATTGAATGCAAGATTGATGCGTTATCAGTGAATGCATTTGAAGAGGCCATCCAAGAATATGATGTTTGCTTAT TAGGGCCTCAAGTCCGTTTTCAGTTGGAAGAGCTACGCAAAACGGCCGATGAATATGGCAAAAACATTGCAGCTATCTCT CCTCAAGCTTACGGCATGATGAAAGGTGACGAGGTTCTTCAGCAAGCTTTAGATTTAATTAACTAA
Upstream 100 bases:
>100_bases GGGATTTTGTTCACGAATAACGCAACCGGTTGCGCTTTTTAATGCGGATTTATTTTGCTACAGTTTTTAGGTCGATATTT AAACAAGGGAAGTGTAGAGC
Downstream 100 bases:
>100_bases ATCTGTTTTTCGGACAATATTTTCACTCAATCCTCATTAATTAAATGAGGATAGGGAACTCTTTATCTTAAATATAAGGT GAATCCTATGAAGCTTTATG
Product: PTS system, cellobiose-specific IIB component
Products: NA
Alternate protein names: Glucomannan utilization protein B; PTS system oligo-beta-mannoside-specific EIIB component [H]
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKKILLCCSAGMSTSMLVKKMQQAAESKGIECKIDALSVNAFEEAIQEYDVCLLGPQVRFQLEELRKTADEYGKNIAAIS PQAYGMMKGDEVLQQALDLIN
Sequences:
>Translated_101_residues MKKILLCCSAGMSTSMLVKKMQQAAESKGIECKIDALSVNAFEEAIQEYDVCLLGPQVRFQLEELRKTADEYGKNIAAIS PQAYGMMKGDEVLQQALDLIN >Mature_101_residues MKKILLCCSAGMSTSMLVKKMQQAAESKGIECKIDALSVNAFEEAIQEYDVCLLGPQVRFQLEELRKTADEYGKNIAAIS PQAYGMMKGDEVLQQALDLIN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=92, Percent_Identity=40.2173913043478, Blast_Score=59, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 11148; Mature: 11148
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLCCSAGMSTSMLVKKMQQAAESKGIECKIDALSVNAFEEAIQEYDVCLLGPQVRF CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCEEEECHHHHH QLEELRKTADEYGKNIAAISPQAYGMMKGDEVLQQALDLIN HHHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKKILLCCSAGMSTSMLVKKMQQAAESKGIECKIDALSVNAFEEAIQEYDVCLLGPQVRF CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCEEEECHHHHH QLEELRKTADEYGKNIAAISPQAYGMMKGDEVLQQALDLIN HHHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]