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The map label for this gene is 227081446

Identifier: 227081446

GI number: 227081446

Start: 1306282

End: 1306815

Strand: Direct

Name: 227081446

Synonym: VCM66_1229

Alternate gene names: NA

Gene position: 1306282-1306815 (Clockwise)

Preceding gene: 227081445

Following gene: 227081447

Centisome position: 45.16

GC content: 45.88

Gene sequence:

>534_bases
ATGAGAAGTCTGATTTATGTTGAGCGGTTATTTAACCGTCTTAGCGATCTACTGGGGTTGCTCTCCAGTATTCTGTTTAT
TCTGTTGGTGGCCAACGTCGTGTATGACGTTGTGATGCGCTATGCCTTTAACGATGTTTCTATCGCCTTTCAAGAATTAG
AGTGGCATCTGTTTGCCACGGTTTTTTTGCTTGGTATTCCTTACGCCATTAAAGCGGGCGGCCATGTACGAGTCGATCTG
TTCTATGAACGTTTATCGATGAAAGCACAGGCGGTGATCGACATTCTTGGCACTCTGTTTTTCCTGTTGCCGTTTTGCTT
GTTGGTGGTCTATTTCGGGATCGACTTTGCCAAAGAAAGCTACGCGCTGGGTGAAACGTCTGGTGACCCAGGTGGTTTGC
CATATCGTTGGATTATCAAGGCGATGATCCCACTCTCTTTCACTTTCATGGCGATAAGTGGCGTCGGCTTGATCATTCAC
TCGCTCAATAAAGTGTTTAACCCACGTCTGATGCATGCAGACCAAACTAAGTAA

Upstream 100 bases:

>100_bases
AAGCTGAACTGCGTGTGCAGGAAGCCCAAGAAAAGCACATAACGATAAGCTCCGTGCACATTTGTGACACGGAGCAATTT
GATTAGACAGGGAGTGTGTA

Downstream 100 bases:

>100_bases
GGGAAACGTATGATTGGTATTGTGATGTTTTTCGTTGCCCTGTTTGCACTATTACTGGGTTTCCCCGTTGCTTTTACCTT
TGGGGGCATTGCGCTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Trap Dicarboxylate Transporter Dctm Subunit; TRAP-T Family Tripartite Transporter; C4-Dicarboxylate Transporter Permease; Permease Component Of C4 Dicarboxylate Transporter; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; Tripartite Transporter Small Subunit; TRAP-Type Large Permease Component; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; C4-Dicarboxylate Transporter Small Subunit; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRSLIYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGIPYAIKAGGHVRVDL
FYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGETSGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIH
SLNKVFNPRLMHADQTK

Sequences:

>Translated_177_residues
MRSLIYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGIPYAIKAGGHVRVDL
FYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGETSGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIH
SLNKVFNPRLMHADQTK
>Mature_177_residues
MRSLIYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGIPYAIKAGGHVRVDL
FYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGETSGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIH
SLNKVFNPRLMHADQTK

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20019; Mature: 20019

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLIYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLLGIPYAIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKES
HHHHHCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALGETSGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIHSLNKVFNPRLMHADQTK
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MRSLIYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLLGIPYAIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKES
HHHHHCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALGETSGDPGGLPYRWIIKAMIPLSFTFMAISGVGLIIHSLNKVFNPRLMHADQTK
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA