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The map label for this gene is 227081445

Identifier: 227081445

GI number: 227081445

Start: 1304975

End: 1306180

Strand: Direct

Name: 227081445

Synonym: VCM66_1228

Alternate gene names: NA

Gene position: 1304975-1306180 (Clockwise)

Preceding gene: 227081444

Following gene: 227081446

Centisome position: 45.12

GC content: 48.92

Gene sequence:

>1206_bases
GTGTTACTTGGCTGCGTGGTCTCGCCGATTTCTTGTCTTACGAATATCGACCACATTGTTGACGAGCCTGTTGCAGGGTG
CGCAGGTATGGATAACCAAGGACGTCAAACCATGAGTCTGATTCATCAATCTGTATCACGAGTTATGAAGCGAAGCGTGC
TGCTTATTGCGGCGGGTGTTGCGCTGCTCACAACTTCCGCTTTTGCAGAAGAGAAAGTTTACCGTTTAACACTGGCTGAG
ACATGGGGACCTAACTTCCCAATCTTCGGCGACACCACAAAGAATATGGCGGCAATGGCGGAGAAAATGTCCAATGGCCG
TTTACAAATTCGCATTGATTCTGCCAATAAACATAAAGCGCCACTGGGTGTGTTTGATATGGTGAAATCGGGCCAATACG
ACATGGGACACTCCGCGTCTTATTACTGGAAAGGCAAAGTTCCGAACACTTTGTATTTTACCTCTATGCCTTTTGGTATG
ACGACGGGCGAGCAATACGCATGGTTCTACCACGGTGGTGGTATGGAACTGATGGAGAAGGTTTACTCTCCACACAATAT
GCTCTCATTCCCCGGTGGTAACACCGACGTGCAGATGGGCGGCTGGTTCCAAAAAGAGATCAACAGCGTTGAAGATCTGC
AAGGGCTGAAAATGCGCATTCCCGGTTTTGCCGGAGAAGTGTTAGCGGAGCTCGGTGCCAAACCCACCAACATTGCTCCG
GGAGAGCTATACACCTCGCTCGAGCGTCGCACGATTGATGCGCTAGAGTGGGTAGGACCGTCACTTGACCTACGTATGGG
TTTCCACAAGATTGCGCCTTATTACTACACCGGTTGGCATGAGCCAGCAACTGAGCTGCAATTCTTAGTCAACCAAAAGA
CGTGGGATAAATTGCCTGAAGATCTGCGTGAAATCTTACGTGTTGCAATGCGCACAGCCGCTTACGACATGTATGTTCAA
TCAGTTCATGAAAGTGGCAAAAACTGGGTTTCGATTACCCAAGAGTTCCCAGATGTGAAAGTGAAGACCTTCCCAGCGCC
TGTGATTAAAGCCCTGCGTGAGGTTAACGACCGACTACTGGCGAAACACGCAGCAGAAGATCCACTGGCTAAAGAGATCC
AAGAATCGCAAGCCAACTATCTAAAACAAACACGTAGTTGGACAGATATTTCGCTGCGAGCCTACCTCAATAGCGAATCA
CAATGA

Upstream 100 bases:

>100_bases
TATATTCATTAATCTTTTTTTATCCTTTTGTTTTTCAATGAATTTTATTTTTGTCCTACATAGTAATACTTAAGACGAAT
GGCTAAATCGTGCGGTTAGG

Downstream 100 bases:

>100_bases
TAAGCTGAACTGCGTGTGCAGGAAGCCCAAGAAAAGCACATAACGATAAGCTCCGTGCACATTTGTGACACGGAGCAATT
TGATTAGACAGGGAGTGTGT

Product: putative extracellular solute-binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MLLGCVVSPISCLTNIDHIVDEPVAGCAGMDNQGRQTMSLIHQSVSRVMKRSVLLIAAGVALLTTSAFAEEKVYRLTLAE
TWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGM
TTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAP
GELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQ
SVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAYLNSES
Q

Sequences:

>Translated_401_residues
MLLGCVVSPISCLTNIDHIVDEPVAGCAGMDNQGRQTMSLIHQSVSRVMKRSVLLIAAGVALLTTSAFAEEKVYRLTLAE
TWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGM
TTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAP
GELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQ
SVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAYLNSES
Q
>Mature_401_residues
MLLGCVVSPISCLTNIDHIVDEPVAGCAGMDNQGRQTMSLIHQSVSRVMKRSVLLIAAGVALLTTSAFAEEKVYRLTLAE
TWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGM
TTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAP
GELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQ
SVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAYLNSES
Q

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44953; Mature: 44953

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGCVVSPISCLTNIDHIVDEPVAGCAGMDNQGRQTMSLIHQSVSRVMKRSVLLIAAGV
CEEHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKA
HHHHHHHHHHHHEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
PLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGMELMEK
CCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHH
VYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAP
HCCCCCEEECCCCCCCEEECCHHHHHHCHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCC
GELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPATELQFLVNQKTWDKLPE
HHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHCCCEECCCCCHHHHHHHHHCCHHHHHHHH
DLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCEEEECCHHHHHHHHHHHHHHH
AKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAYLNSESQ
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLLGCVVSPISCLTNIDHIVDEPVAGCAGMDNQGRQTMSLIHQSVSRVMKRSVLLIAAGV
CEEHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKA
HHHHHHHHHHHHEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
PLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGMELMEK
CCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHH
VYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAP
HCCCCCEEECCCCCCCEEECCHHHHHHCHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCC
GELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPATELQFLVNQKTWDKLPE
HHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHCCCEECCCCCHHHHHHHHHCCHHHHHHHH
DLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCEEEECCHHHHHHHHHHHHHHH
AKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAYLNSESQ
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA