| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is grxA [H]
Identifier: 227081319
GI number: 227081319
Start: 1174684
End: 1174962
Strand: Reverse
Name: grxA [H]
Synonym: VCM66_1102
Alternate gene names: 227081319
Gene position: 1174962-1174684 (Counterclockwise)
Preceding gene: 227081321
Following gene: 227081318
Centisome position: 40.62
GC content: 44.09
Gene sequence:
>279_bases ATGAAGGAGAAAGATATGTTTGTGGTCATTTTTGGTCGTCCTGGCTGTCCTTACTGTGTTCGTGCCAAAGAGCATGCTGA AACATTGAAAGCAAAGCGTGATGATTTTAACTATCGCTATGTTGATATCCACGCCGAAGGCATCACTAAAGCCGATCTAG AAAAAACCATCGGCAAGCCAGTCGAAACCGTTCCACAGATTTTCATCGATGAACAACACATCGGCGGCTGCACAGACTTC GAAGCGTACGCAAAAGAGAATCTAGGTCTATTTGACTAA
Upstream 100 bases:
>100_bases GCGAAGCATAGAGTAAAACCATTGTTTTTATCTATTAAATCAAGAGGAAAAATCACGCTTTATTTCCCCCTTTGAATCGG GCATAGTACCCGCAAACAAA
Downstream 100 bases:
>100_bases TAAAATGATAAATCGAAAAAGCCTGTGAATATCGCAGGCTTTTTTGTTCGTACGAGATTCTGCAGACTTAGGATTTTTTA GCTATTTCGCTCCAAATAAT
Product: glutaredoxin 1
Products: deoxyribonucleotides [C]
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MKEKDMFVVIFGRPGCPYCVRAKEHAETLKAKRDDFNYRYVDIHAEGITKADLEKTIGKPVETVPQIFIDEQHIGGCTDF EAYAKENLGLFD
Sequences:
>Translated_92_residues MKEKDMFVVIFGRPGCPYCVRAKEHAETLKAKRDDFNYRYVDIHAEGITKADLEKTIGKPVETVPQIFIDEQHIGGCTDF EAYAKENLGLFD >Mature_92_residues MKEKDMFVVIFGRPGCPYCVRAKEHAETLKAKRDDFNYRYVDIHAEGITKADLEKTIGKPVETVPQIFIDEQHIGGCTDF EAYAKENLGLFD
Specific function: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1787073, Length=83, Percent_Identity=72.289156626506, Blast_Score=130, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011902 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 10513; Mature: 10513
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKDMFVVIFGRPGCPYCVRAKEHAETLKAKRDDFNYRYVDIHAEGITKADLEKTIGKP CCCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCC VETVPQIFIDEQHIGGCTDFEAYAKENLGLFD HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MKEKDMFVVIFGRPGCPYCVRAKEHAETLKAKRDDFNYRYVDIHAEGITKADLEKTIGKP CCCCCEEEEEECCCCCCCEECCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCC VETVPQIFIDEQHIGGCTDFEAYAKENLGLFD HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ribonucleotides [C]
Specific reaction: ribonucleotides = deoxyribonucleotides [C]
General reaction: deoxyribonucleotide biosynthesis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]