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The map label for this gene is ybjL [C]

Identifier: 227081318

GI number: 227081318

Start: 1172806

End: 1174482

Strand: Reverse

Name: ybjL [C]

Synonym: VCM66_1101

Alternate gene names: 227081318

Gene position: 1174482-1172806 (Counterclockwise)

Preceding gene: 227081319

Following gene: 227081315

Centisome position: 40.6

GC content: 47.35

Gene sequence:

>1677_bases
GTGAACATCGACGTCGTTTTGTTGCTAGAGCAAAATCCAATTTTGCTGATATTTGTTGTCCTCGCCATCGGTCTCTCTTT
CGGGAAAATTCGCTTTGGCAGCTTCCAATTGGGTAATTCGATTGGAGTGCTCATCACCTCTCTGATCATGGGGCATCTTG
GTTTTTCCTTTACACCGGAAGCATTAACCATCGGCTTTATGCTCTTTATTTATTGTGTCGGCATTGAAGCGGGTCCTAAC
TTCTTTGGTATTTTCTTCCGCGATGGTAAACACTACTTAATTCTAAGCTTAGTGGTCTTGATCACTGCGACTTGGATTGC
CTACTTTGGTGGTTACTATCTTAATCTGGATTATGGCTTAGCCGCCGGGATGATGGCGGGCGCATTAACCTCAACACCCG
TACTGGTTGGTGCTCAGGATGCGCTCAATTCTGGGCTTGCCGCGGTACCAAGACATATGGATTTATCACTGATTTTAGAT
AATGTCTCGGTCGGTTATGCGATGGCCTACTTGATCGGCCTTATCAGCATGATCATGTTTGCTAAATTACTCCCTAAGTT
GCAAAAGCAAAACCTGTCCGATTCGGCTCAACAAATCGCGCAAGAACGAGGGTTAGGCAGTCAGCGTAAAGTCTATCTGC
CGATCATCCGTGCCTATCGAGTCGGACCTGAACTGATTAACTGGATCGACGGTCGTAATCTGCGCGAGCTGGGTATCTAC
CGTCAAACAGGCTGTTATATTGAGCGTATCCGCCGACATGGCATTTTGGCCCATCCTGATGGTGATGCCATTTTGCAAGA
AGGGGATGAAATTGCTCTCGTAGGTTTCCCAGATAGTCACGCTCGTCTTGACCCGAGCTTTCGCAATGGCAAAGAAGTGT
TTGACCGTAACTTACTCGACCTACGAATTTCAGAAGAAGAGATCGTGGTAAAAAGTGACAGCATTGCGGGAAAACGTCTC
TCCGATCTTAATCTTTCGGAATACGGCTGCTTCCTTAACCGAGTCGTTCGTGCGCAAATCGAAATGCCGATGGATCTGGA
TATCGTGCTCGCCAAAGGCGATGTCCTGCAAGTCAGCGGCGAGAAAAGCAAAGTAAAGGGGCTGGCAGATAAAATCGGTT
TTATCTCTGTACACAGCCAAATGGCTGATCTGCTTGCTTTCTGTAGCTTTTTTATTCTTGGCATTCTGTTTGGTTTGGTC
ACCATGACCTTTGGCCAAGTGTCGTTTAGCTTAGGTAATGCGGTGGGGTTACTGCTCTCTGGTATCACTTTGGGCTTTTT
GCGAGCCAACCACCCGACTTTCGGTTATGTTCCGCAAGGCGCACTCAATATGGTCAAAGACCTTGGTCTAGCCATCTTCA
TGGTCGGTATTGGGCTCAATGCAGGTAGCAAAATGTTCCAGCATCTCTCCGAAGTAGGTGTGCAAGTGATCGGTTTAGCC
TTTTTAGTGAGCGTTGTACCTGTCGTGTTCGCTTACTTGGTTGGCGCCTACATTCTAAAGATGAACCGCGCTCTATTGTT
TGGTGCGATTATTGGCGCGCGCACCTGTGCTCCGGCGATGGATGTGGTTAATGAATACGCTAAGTCTACCATTCCAGCAC
TGGGTTATGCGGGCACCTACGCGATTGCCAATATCTTAATGACCTTAACGGGTACCATCTTTATCTTGCTCAGTTAA

Upstream 100 bases:

>100_bases
CGCATCCGCGCAAAAATTCACTTATCTTTTTGCAATATTCGGATACAATTCCCAAAATTTTATTATTTCCCCTCTTGTCA
CGCGTGAATTGAGTTAAATC

Downstream 100 bases:

>100_bases
ATTGGAGTTATCCAATACTGTGGATCAAAAAAGGCACCTTGCGGTGCCTTTTGCGTATTGTGAGATGTCTAGTGGACCAC
CTCTTCGCGAGTACCGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MNIDVVLLLEQNPILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPEALTIGFMLFIYCVGIEAGPN
FFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGLAAGMMAGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILD
NVSVGYAMAYLIGLISMIMFAKLLPKLQKQNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINWIDGRNLRELGIY
RQTGCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRISEEEIVVKSDSIAGKRL
SDLNLSEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVSGEKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLV
TMTFGQVSFSLGNAVGLLLSGITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQVIGLA
FLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYAGTYAIANILMTLTGTIFILLS

Sequences:

>Translated_558_residues
MNIDVVLLLEQNPILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPEALTIGFMLFIYCVGIEAGPN
FFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGLAAGMMAGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILD
NVSVGYAMAYLIGLISMIMFAKLLPKLQKQNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINWIDGRNLRELGIY
RQTGCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRISEEEIVVKSDSIAGKRL
SDLNLSEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVSGEKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLV
TMTFGQVSFSLGNAVGLLLSGITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQVIGLA
FLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYAGTYAIANILMTLTGTIFILLS
>Mature_558_residues
MNIDVVLLLEQNPILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPEALTIGFMLFIYCVGIEAGPN
FFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGLAAGMMAGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILD
NVSVGYAMAYLIGLISMIMFAKLLPKLQKQNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINWIDGRNLRELGIY
RQTGCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRISEEEIVVKSDSIAGKRL
SDLNLSEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVSGEKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLV
TMTFGQVSFSLGNAVGLLLSGITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQVIGLA
FLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYAGTYAIANILMTLTGTIFILLS

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI1787071, Length=560, Percent_Identity=64.6428571428572, Blast_Score=746, Evalue=0.0,
Organism=Escherichia coli, GI87082315, Length=528, Percent_Identity=26.5151515151515, Blast_Score=150, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1101_VIBCM (C3LLJ2)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002809869.1
- GeneID:   7772379
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_1101
- OMA:   DHLSLGY
- ProtClustDB:   PRK04972
- HAMAP:   MF_01015
- InterPro:   IPR006037
- InterPro:   IPR023017
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 60504; Mature: 60504

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x26839060)-; HASH(0x254f1960)-; HASH(0x263b3930)-; HASH(0x263446a8)-; HASH(0x254aa8f8)-; HASH(0x2618ac38)-; HASH(0x26592988)-; HASH(0x2695289c)-; HASH(0x26000b5c)-; HASH(0x26416218)-; HASH(0x23eb1300)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDVVLLLEQNPILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPE
CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCEECCCHHHHHHHHHHHHHCCCCCCHH
ALTIGFMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECHHH
AAGMMAGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILDNVSVGYAMAYLIGLISMIMF
HHHHHHHHHCCCCEEEECHHHHCCCHHHCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHH
AKLLPKLQKQNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINWIDGRNLRELGIY
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCHHHHCCC
RQTGCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLD
HHCCHHHHHHHHCCCEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEE
LRISEEEIVVKSDSIAGKRLSDLNLSEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVSG
EEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECC
EKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLVTMTFGQVSFSLGNAVGLLLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQVIGLA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYAGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AIANILMTLTGTIFILLS
HHHHHHHHHHHHEEEEEH
>Mature Secondary Structure
MNIDVVLLLEQNPILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPE
CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCEECCCHHHHHHHHHHHHHCCCCCCHH
ALTIGFMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECHHH
AAGMMAGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILDNVSVGYAMAYLIGLISMIMF
HHHHHHHHHCCCCEEEECHHHHCCCHHHCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHH
AKLLPKLQKQNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINWIDGRNLRELGIY
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCHHHHCCC
RQTGCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLD
HHCCHHHHHHHHCCCEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEE
LRISEEEIVVKSDSIAGKRLSDLNLSEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVSG
EEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECC
EKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLVTMTFGQVSFSLGNAVGLLLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQVIGLA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYAGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AIANILMTLTGTIFILLS
HHHHHHHHHHHHEEEEEH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA