Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227081224

Identifier: 227081224

GI number: 227081224

Start: 1078901

End: 1079032

Strand: Direct

Name: 227081224

Synonym: VCM66_1006

Alternate gene names: NA

Gene position: 1078901-1079032 (Clockwise)

Preceding gene: 227081223

Following gene: 227081225

Centisome position: 37.3

GC content: 43.94

Gene sequence:

>132_bases
ATGGCAAACCAAGAGTTCAAAGAACCCTTCAATATCTATTACTTTCTAGGCGTGGTTGCAGTCCTGCTAATCCCGACTCT
GCCTGCAACACTGACTTGGATTCGTGTATTTAACGGGTACGCTGGATTTTAA

Upstream 100 bases:

>100_bases
GTGTTTGTTGCAGCTCGCTTTCGTTATAGTTCCGACCACAAAATTAATGAGGCTACCTTAGAGTTGCCCAGTTTAAAGTC
ACCCAAAAGAGAAAATTACA

Downstream 100 bases:

>100_bases
TGCGTTCATCCTTACCACGTTTTTTGTTCAGTGTTATTGGAATAACCAGTCTATGCCTAGGGATACTGGGCATATTTCTT
CCTCTTCTGCCCACCACACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 43; Mature: 42

Protein sequence:

>43_residues
MANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF

Sequences:

>Translated_43_residues
MANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF
>Mature_42_residues
ANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4926; Mature: 4795

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ANQEFKEPFNIYYFLGVVAVLLIPTLPATLTWIRVFNGYAGF
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA