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The map label for this gene is 227080994

Identifier: 227080994

GI number: 227080994

Start: 828735

End: 830105

Strand: Reverse

Name: 227080994

Synonym: VCM66_0773

Alternate gene names: NA

Gene position: 830105-828735 (Counterclockwise)

Preceding gene: 227080995

Following gene: 227080993

Centisome position: 28.7

GC content: 42.3

Gene sequence:

>1371_bases
GTGTTGTCGATGGAAGAGCTAACCGTACAAGCTTTTATCAGAGGTGAATGGATAGATATTGGTATCATCTCATTCCCTAA
AAGTAGCCAACATAATTTTCGAGTGACTGAACTCAACTACCTCAGCGACTATGCGCTAGAACATTACGATAAAGATGACT
TTCACGCTGTTTCACTAAACCACCCTGTCTCATTCATTTTTGATGACATGGGTAAGCCTGGATGGTTAAAGTTTCTAGAC
GATATTATGCCTAGTGGCGCTAGTAGACGATACTGGGTCAAACACCTAGATATTGAAGATCTTAGTTCTGATGAACAAGA
CTATGTTTTGCTCAAATTTGGCACGATGTCGCCTATTGGTAACTTAAGAATAAAAGACTCCCTTCCTGAACGCTACGAAG
TCGCAGACAACCTCTACTTCTCTGTTGATGATGTTAAAAATCGAGCAGGTGATTTCCTCGACTATGCACAGCAAAGAGGG
GCAGCCGCAGGTGGTGCAACAGGGGCTGGAGGTGAAGCGCCAAAACTGATCCTCCGATGTGGTTTCGATCATGGATCTGG
CAGCGAAAAAATATGGATTGATCCATACCAAGATGACAATAGCAGCCACGACTTACATTACTTAGTAAAGTACCCTAGAG
GCTCAAGAAGCACCATCGACTGTAATATTCTAAGAGCTGAGTTCTACTTCTACCACGAGCTAACTGAAATGGGAGTTGAA
ACGATCTCCACCGACGGTATGCGCTTGGAGGAAGGATTAAACTACCCTTCCTTATGGCTTCCTCGATTTGATGTTCAAAT
TATTGATCAACAAATAGAGCGATTTGGCATGGAATCAGTGTATTCCATTTTGAACAAAGGCGCTGGAGTCACTCTTGATC
ACGAAACAACAATCCGAACTCTCATAGAAAAAATTACTGAAAGTAATATGGTTAAACACCAAGGGTATAGGTTTGATACC
CAAGCTTTCGTTATTGAATGGGTGAAGAGAGATCTACTCAACATCTTGTTTGGTAATAGTGATAACCATGGCAGAAATAC
TTCATTCTTAAAGGGTGATGGAGTCATAAAGCTTGCTCCCATTTACGATTTCGCACCAATGAAAGCCGATCCTGCAGGAA
TTCCAAGAACAACAAAATGGAAAGCCCCACTAGAGGTTGGCGGAACTTACGACTTTGTCGGCATTGCAGACACCTTATCT
GATCTGGTGCCAAAGGAAATGTTATTAAAAGAGCTAGCAATTACTGCAAGTAAATGCGTAGGCCTAAAGCAGAGACTCGC
TTTACGAGGAGTACCAGAACAAATCTTGGAGATGCCGGCCGTTGGACTTAATTATTTATCAGAAAAGCTCACTAAATGGG
GGCTACTATGA

Upstream 100 bases:

>100_bases
ACTCATAAATAGTATCCACATACATTAATGAGTAATTTTTTACTCACAACTTGAAAGAAAATGGCTTTAAGAGTAAATTT
TTACTCATTGATAAGTAGAG

Downstream 100 bases:

>100_bases
AGCCAAGCAATAAAGAGTCCGTACAAGATACGGTAGCTCGTCTAAGAGAAAACCGAAATCAACAGCAGTCCAAGGTTGGG
AAGAATGCAACTCATTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: HipA Domain Protein; Capsule Biosynthesis Protein

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MLSMEELTVQAFIRGEWIDIGIISFPKSSQHNFRVTELNYLSDYALEHYDKDDFHAVSLNHPVSFIFDDMGKPGWLKFLD
DIMPSGASRRYWVKHLDIEDLSSDEQDYVLLKFGTMSPIGNLRIKDSLPERYEVADNLYFSVDDVKNRAGDFLDYAQQRG
AAAGGATGAGGEAPKLILRCGFDHGSGSEKIWIDPYQDDNSSHDLHYLVKYPRGSRSTIDCNILRAEFYFYHELTEMGVE
TISTDGMRLEEGLNYPSLWLPRFDVQIIDQQIERFGMESVYSILNKGAGVTLDHETTIRTLIEKITESNMVKHQGYRFDT
QAFVIEWVKRDLLNILFGNSDNHGRNTSFLKGDGVIKLAPIYDFAPMKADPAGIPRTTKWKAPLEVGGTYDFVGIADTLS
DLVPKEMLLKELAITASKCVGLKQRLALRGVPEQILEMPAVGLNYLSEKLTKWGLL

Sequences:

>Translated_456_residues
MLSMEELTVQAFIRGEWIDIGIISFPKSSQHNFRVTELNYLSDYALEHYDKDDFHAVSLNHPVSFIFDDMGKPGWLKFLD
DIMPSGASRRYWVKHLDIEDLSSDEQDYVLLKFGTMSPIGNLRIKDSLPERYEVADNLYFSVDDVKNRAGDFLDYAQQRG
AAAGGATGAGGEAPKLILRCGFDHGSGSEKIWIDPYQDDNSSHDLHYLVKYPRGSRSTIDCNILRAEFYFYHELTEMGVE
TISTDGMRLEEGLNYPSLWLPRFDVQIIDQQIERFGMESVYSILNKGAGVTLDHETTIRTLIEKITESNMVKHQGYRFDT
QAFVIEWVKRDLLNILFGNSDNHGRNTSFLKGDGVIKLAPIYDFAPMKADPAGIPRTTKWKAPLEVGGTYDFVGIADTLS
DLVPKEMLLKELAITASKCVGLKQRLALRGVPEQILEMPAVGLNYLSEKLTKWGLL
>Mature_456_residues
MLSMEELTVQAFIRGEWIDIGIISFPKSSQHNFRVTELNYLSDYALEHYDKDDFHAVSLNHPVSFIFDDMGKPGWLKFLD
DIMPSGASRRYWVKHLDIEDLSSDEQDYVLLKFGTMSPIGNLRIKDSLPERYEVADNLYFSVDDVKNRAGDFLDYAQQRG
AAAGGATGAGGEAPKLILRCGFDHGSGSEKIWIDPYQDDNSSHDLHYLVKYPRGSRSTIDCNILRAEFYFYHELTEMGVE
TISTDGMRLEEGLNYPSLWLPRFDVQIIDQQIERFGMESVYSILNKGAGVTLDHETTIRTLIEKITESNMVKHQGYRFDT
QAFVIEWVKRDLLNILFGNSDNHGRNTSFLKGDGVIKLAPIYDFAPMKADPAGIPRTTKWKAPLEVGGTYDFVGIADTLS
DLVPKEMLLKELAITASKCVGLKQRLALRGVPEQILEMPAVGLNYLSEKLTKWGLL

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51578; Mature: 51578

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMEELTVQAFIRGEWIDIGIISFPKSSQHNFRVTELNYLSDYALEHYDKDDFHAVSLN
CCCHHHHHHHHEECCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECC
HPVSFIFDDMGKPGWLKFLDDIMPSGASRRYWVKHLDIEDLSSDEQDYVLLKFGTMSPIG
CCHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEEECCCCCCC
NLRIKDSLPERYEVADNLYFSVDDVKNRAGDFLDYAQQRGAAAGGATGAGGEAPKLILRC
CEEECCCCCHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
GFDHGSGSEKIWIDPYQDDNSSHDLHYLVKYPRGSRSTIDCNILRAEFYFYHELTEMGVE
CCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEHHHHHHHHHHHCHH
TISTDGMRLEEGLNYPSLWLPRFDVQIIDQQIERFGMESVYSILNKGAGVTLDHETTIRT
HHCCCCEEHHHCCCCCCEECCCCHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCHHHHHH
LIEKITESNMVKHQGYRFDTQAFVIEWVKRDLLNILFGNSDNHGRNTSFLKGDGVIKLAP
HHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEC
IYDFAPMKADPAGIPRTTKWKAPLEVGGTYDFVGIADTLSDLVPKEMLLKELAITASKCV
CCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHH
GLKQRLALRGVPEQILEMPAVGLNYLSEKLTKWGLL
HHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSMEELTVQAFIRGEWIDIGIISFPKSSQHNFRVTELNYLSDYALEHYDKDDFHAVSLN
CCCHHHHHHHHEECCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECC
HPVSFIFDDMGKPGWLKFLDDIMPSGASRRYWVKHLDIEDLSSDEQDYVLLKFGTMSPIG
CCHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEEECCCCCCC
NLRIKDSLPERYEVADNLYFSVDDVKNRAGDFLDYAQQRGAAAGGATGAGGEAPKLILRC
CEEECCCCCHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
GFDHGSGSEKIWIDPYQDDNSSHDLHYLVKYPRGSRSTIDCNILRAEFYFYHELTEMGVE
CCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEHHHHHHHHHHHCHH
TISTDGMRLEEGLNYPSLWLPRFDVQIIDQQIERFGMESVYSILNKGAGVTLDHETTIRT
HHCCCCEEHHHCCCCCCEECCCCHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCHHHHHH
LIEKITESNMVKHQGYRFDTQAFVIEWVKRDLLNILFGNSDNHGRNTSFLKGDGVIKLAP
HHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEC
IYDFAPMKADPAGIPRTTKWKAPLEVGGTYDFVGIADTLSDLVPKEMLLKELAITASKCV
CCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHH
GLKQRLALRGVPEQILEMPAVGLNYLSEKLTKWGLL
HHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA