| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080995
Identifier: 227080995
GI number: 227080995
Start: 830216
End: 830398
Strand: Reverse
Name: 227080995
Synonym: VCM66_0774
Alternate gene names: NA
Gene position: 830398-830216 (Counterclockwise)
Preceding gene: 227080997
Following gene: 227080994
Centisome position: 28.71
GC content: 38.8
Gene sequence:
>183_bases TTGGCTTTAAGTGGTTCAGAGCGTCTCATCAAGATTCACTTTGTTCATTTAAGGCAACTGTTCATTTATTACGAACAACC TGCATCACTGAACAAACAATTAACGCCCAGCTCCCTATCGCAGCTTTACATAGCTAAAACAATCCATCCTGCTCATCAAC AAATTTTGACTTACAACTCATGA
Upstream 100 bases:
>100_bases CAATAAGTTAAAAAACAAGATCAACTTACCCCAGCCCACCAATCACTAGTAACGGGACGTCTCAGGACGTCCCGTTTTCT TTTCTAAACTCTTATCCTAT
Downstream 100 bases:
>100_bases GTAATAATTTACTCATAAATAGTATCCACATACATTAATGAGTAATTTTTTACTCACAACTTGAAAGAAAATGGCTTTAA GAGTAAATTTTTACTCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MALSGSERLIKIHFVHLRQLFIYYEQPASLNKQLTPSSLSQLYIAKTIHPAHQQILTYNS
Sequences:
>Translated_60_residues MALSGSERLIKIHFVHLRQLFIYYEQPASLNKQLTPSSLSQLYIAKTIHPAHQQILTYNS >Mature_59_residues ALSGSERLIKIHFVHLRQLFIYYEQPASLNKQLTPSSLSQLYIAKTIHPAHQQILTYNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6939; Mature: 6808
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSGSERLIKIHFVHLRQLFIYYEQPASLNKQLTPSSLSQLYIAKTIHPAHQQILTYNS CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHEEEECCC >Mature Secondary Structure ALSGSERLIKIHFVHLRQLFIYYEQPASLNKQLTPSSLSQLYIAKTIHPAHQQILTYNS CCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA