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The map label for this gene is 227080993

Identifier: 227080993

GI number: 227080993

Start: 828271

End: 828750

Strand: Reverse

Name: 227080993

Synonym: VCM66_0772

Alternate gene names: NA

Gene position: 828750-828271 (Counterclockwise)

Preceding gene: 227080994

Following gene: 227080992

Centisome position: 28.65

GC content: 44.58

Gene sequence:

>480_bases
ATGGGGGCTACTATGAAGCCAAGCAATAAAGAGTCCGTACAAGATACGGTAGCTCGTCTAAGAGAAAACCGAAATCAACA
GCAGTCCAAGGTTGGGAAGAATGCAACTCATTCGAGCAAAGAGCAAACACCACTCGATACTCCAACGAGATCGAAAGCCT
CAAAAAACGCCAAAGCAGTAAGTGCAGCAGAGCGCAAAACCGAGGCAAACAAAATCATCAAACACTTATTGCTTGGAGAG
CTAACACAGGGCCAAGCGCTGAAAAGTCTACGCATTAATATACTGGGACTCAAACAGGATGTATTCGCAAGACTTGTCGA
TGTCTCAAGAAAAACACTCTCAGACATAGAGAATGATCGGGGCAGCTACAATACAGAGATTCTCAACAAGGTATTCAAAC
CATTTAGCTTAAAAATCGGGCTGCTGCCTTCTTCCCCCGATGCGTTAAAATCGCTCTTAATGGATGGTGAGGATGGGTAA

Upstream 100 bases:

>100_bases
GCGTAGGCCTAAAGCAGAGACTCGCTTTACGAGGAGTACCAGAACAAATCTTGGAGATGCCGGCCGTTGGACTTAATTAT
TTATCAGAAAAGCTCACTAA

Downstream 100 bases:

>100_bases
ATTGCTCCGTATCAGCTCTATTTATTTAGATTAAATTGCTATAACAAGCTAGCATTTTTAAATGATTTAGGAATACATGG
ACACGGGTTCAGTTCCTTTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGATMKPSNKESVQDTVARLRENRNQQQSKVGKNATHSSKEQTPLDTPTRSKASKNAKAVSAAERKTEANKIIKHLLLGE
LTQGQALKSLRINILGLKQDVFARLVDVSRKTLSDIENDRGSYNTEILNKVFKPFSLKIGLLPSSPDALKSLLMDGEDG

Sequences:

>Translated_159_residues
MGATMKPSNKESVQDTVARLRENRNQQQSKVGKNATHSSKEQTPLDTPTRSKASKNAKAVSAAERKTEANKIIKHLLLGE
LTQGQALKSLRINILGLKQDVFARLVDVSRKTLSDIENDRGSYNTEILNKVFKPFSLKIGLLPSSPDALKSLLMDGEDG
>Mature_158_residues
GATMKPSNKESVQDTVARLRENRNQQQSKVGKNATHSSKEQTPLDTPTRSKASKNAKAVSAAERKTEANKIIKHLLLGEL
TQGQALKSLRINILGLKQDVFARLVDVSRKTLSDIENDRGSYNTEILNKVFKPFSLKIGLLPSSPDALKSLLMDGEDG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17456; Mature: 17325

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATMKPSNKESVQDTVARLRENRNQQQSKVGKNATHSSKEQTPLDTPTRSKASKNAKAV
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SAAERKTEANKIIKHLLLGELTQGQALKSLRINILGLKQDVFARLVDVSRKTLSDIENDR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
GSYNTEILNKVFKPFSLKIGLLPSSPDALKSLLMDGEDG
CCCCHHHHHHHHCCHHEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
GATMKPSNKESVQDTVARLRENRNQQQSKVGKNATHSSKEQTPLDTPTRSKASKNAKAV
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SAAERKTEANKIIKHLLLGELTQGQALKSLRINILGLKQDVFARLVDVSRKTLSDIENDR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
GSYNTEILNKVFKPFSLKIGLLPSSPDALKSLLMDGEDG
CCCCHHHHHHHHCCHHEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA