| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is pheA [H]
Identifier: 227080885
GI number: 227080885
Start: 712277
End: 713452
Strand: Reverse
Name: pheA [H]
Synonym: VCM66_0663
Alternate gene names: 227080885
Gene position: 713452-712277 (Counterclockwise)
Preceding gene: 227080886
Following gene: 227080884
Centisome position: 24.67
GC content: 47.36
Gene sequence:
>1176_bases ATGACAGACAAACAATACTCACTCGACGATATTCGCTTACGGCTAAACGAACTCGACGATCAACTGCTAAACCTGCTGTC AGAACGACGCAAAATGAGTATTGAGGTCGCCAAAAGCAAAGTCGAAACCGCGAAACCTGTACGTGATCCGGCTCGTGAAC AGCAGCTACTGGTAAAACTCATCAATGCTGGCAAAGAGAAATATCAGCTCGATCCTCAATACATCACCAAAATTTTCCAC ACCATCATTGAAGATTCGGTTTTGCTTCAGCAATCCTATCTGCAAAACCTTGCGAATCCACAAAGTCGTAAGCCATTGGC TAGAGTCGCCTTTTTAGGCGCTAAAGGCTCTTATTCACATCTGGCGACTCGCGAGTATTTCAGCCGCAAAAATACAGAGC TGATTGAGCTCAACTGCGACCATTTTAAAGAGGTGGCAAGAACCGTGGAATCCGGCCATGCGGATTATGGTGTGCTACCG ATTGAAAACACCAGCTCAGGCTCCATCAACGAAGTTTACGATTTGCTGCAGCACACCACACTGTACATAGTGGGTGAGTT AACGCAGCCAATAGAGCATTGCCTGGTGGCCACGCAAGAGATTCGTTTGGAGGATCTGAAAGTCCTCTATTCCCATCCAC AGCCTCACCAGCAGTGCAGCGAATTTCTTAGCCGCTTAAAAGGGGTCAAGTTAGAAAGTTGCGCCAGTACTGCAGATGCC ATGAAAAAAGTGCAAGAGCTCAATCGTGCGGATGTAGCAGCGATTGGCAACTCAGCCAGTGGAAAGCTGTACGGACTGCA ACCGATTCAAGGAAATATTGCCAACCAAACCGAAAATCACACTCGCTTTATCGTGGTGGCTCGTAAACCCGTCGACGTTT CACCACAAATTCCAGCCAAAACCACCTTGATTATGTCAACTTCACAAGAGGCGGGCTCGCTGGTTTCGACCTTACTCGTG CTGCAACGTTACGGCATTAATATGACTAAGCTGGAATCGCGTCCGATTATGGGTAATCCGTGGGAAGAAATGTTCTACGT AGATTTAGAAGCGCACATTGACTCCGATGAGATGCAGCAAGCGTTGGCAGAACTCACTCAACTGACTCGACACCTTAAAG TGCTTGGCTGCTACCCTAGTGAAAACGTCAAACCCACTCAGGTGAAATTCATTTAG
Upstream 100 bases:
>100_bases TTCTCCAATAATGTTTGGAGGCTCGCTCGTTGTTCAAAGACAAGTCAAAAACGAACAGAAAGCCTCCTCTTAAGGGGGCT TTTTTTATAAGGATAACTTT
Downstream 100 bases:
>100_bases CGTCAATAAATTGAACCTTTTAAGCTGACAGCTTCACCCGCTCTGATTATAATGCGACCAAATTATACATAGAGTTAGGT GATCCAGGCTGTCAGCGTAG
Product: chorismate mutase/prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTDKQYSLDDIRLRLNELDDQLLNLLSERRKMSIEVAKSKVETAKPVRDPAREQQLLVKLINAGKEKYQLDPQYITKIFH TIIEDSVLLQQSYLQNLANPQSRKPLARVAFLGAKGSYSHLATREYFSRKNTELIELNCDHFKEVARTVESGHADYGVLP IENTSSGSINEVYDLLQHTTLYIVGELTQPIEHCLVATQEIRLEDLKVLYSHPQPHQQCSEFLSRLKGVKLESCASTADA MKKVQELNRADVAAIGNSASGKLYGLQPIQGNIANQTENHTRFIVVARKPVDVSPQIPAKTTLIMSTSQEAGSLVSTLLV LQRYGINMTKLESRPIMGNPWEEMFYVDLEAHIDSDEMQQALAELTQLTRHLKVLGCYPSENVKPTQVKFI
Sequences:
>Translated_391_residues MTDKQYSLDDIRLRLNELDDQLLNLLSERRKMSIEVAKSKVETAKPVRDPAREQQLLVKLINAGKEKYQLDPQYITKIFH TIIEDSVLLQQSYLQNLANPQSRKPLARVAFLGAKGSYSHLATREYFSRKNTELIELNCDHFKEVARTVESGHADYGVLP IENTSSGSINEVYDLLQHTTLYIVGELTQPIEHCLVATQEIRLEDLKVLYSHPQPHQQCSEFLSRLKGVKLESCASTADA MKKVQELNRADVAAIGNSASGKLYGLQPIQGNIANQTENHTRFIVVARKPVDVSPQIPAKTTLIMSTSQEAGSLVSTLLV LQRYGINMTKLESRPIMGNPWEEMFYVDLEAHIDSDEMQQALAELTQLTRHLKVLGCYPSENVKPTQVKFI >Mature_390_residues TDKQYSLDDIRLRLNELDDQLLNLLSERRKMSIEVAKSKVETAKPVRDPAREQQLLVKLINAGKEKYQLDPQYITKIFHT IIEDSVLLQQSYLQNLANPQSRKPLARVAFLGAKGSYSHLATREYFSRKNTELIELNCDHFKEVARTVESGHADYGVLPI ENTSSGSINEVYDLLQHTTLYIVGELTQPIEHCLVATQEIRLEDLKVLYSHPQPHQQCSEFLSRLKGVKLESCASTADAM KKVQELNRADVAAIGNSASGKLYGLQPIQGNIANQTENHTRFIVVARKPVDVSPQIPAKTTLIMSTSQEAGSLVSTLLVL QRYGINMTKLESRPIMGNPWEEMFYVDLEAHIDSDEMQQALAELTQLTRHLKVLGCYPSENVKPTQVKFI
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=378, Percent_Identity=55.026455026455, Blast_Score=422, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6324013, Length=323, Percent_Identity=22.6006191950464, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 44131; Mature: 44000
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00857 PREPHENATE_DEHYDR_1 ; PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKQYSLDDIRLRLNELDDQLLNLLSERRKMSIEVAKSKVETAKPVRDPAREQQLLVKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH INAGKEKYQLDPQYITKIFHTIIEDSVLLQQSYLQNLANPQSRKPLARVAFLGAKGSYSH HHCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCHHH LATREYFSRKNTELIELNCDHFKEVARTVESGHADYGVLPIENTSSGSINEVYDLLQHTT HHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHH LYIVGELTQPIEHCLVATQEIRLEDLKVLYSHPQPHQQCSEFLSRLKGVKLESCASTADA HEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH MKKVQELNRADVAAIGNSASGKLYGLQPIQGNIANQTENHTRFIVVARKPVDVSPQIPAK HHHHHHHCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC TTLIMSTSQEAGSLVSTLLVLQRYGINMTKLESRPIMGNPWEEMFYVDLEAHIDSDEMQQ EEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHEEEEEEHHCCCHHHHHH ALAELTQLTRHLKVLGCYPSENVKPTQVKFI HHHHHHHHHHHHHEEECCCCCCCCCCEEEEC >Mature Secondary Structure TDKQYSLDDIRLRLNELDDQLLNLLSERRKMSIEVAKSKVETAKPVRDPAREQQLLVKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH INAGKEKYQLDPQYITKIFHTIIEDSVLLQQSYLQNLANPQSRKPLARVAFLGAKGSYSH HHCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCHHH LATREYFSRKNTELIELNCDHFKEVARTVESGHADYGVLPIENTSSGSINEVYDLLQHTT HHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHH LYIVGELTQPIEHCLVATQEIRLEDLKVLYSHPQPHQQCSEFLSRLKGVKLESCASTADA HEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH MKKVQELNRADVAAIGNSASGKLYGLQPIQGNIANQTENHTRFIVVARKPVDVSPQIPAK HHHHHHHCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC TTLIMSTSQEAGSLVSTLLVLQRYGINMTKLESRPIMGNPWEEMFYVDLEAHIDSDEMQQ EEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHEEEEEEHHCCCHHHHHH ALAELTQLTRHLKVLGCYPSENVKPTQVKFI HHHHHHHHHHHHHEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1512561; 1444388 [H]