Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is recX [H]

Identifier: 227080727

GI number: 227080727

Start: 533340

End: 533798

Strand: Direct

Name: recX [H]

Synonym: VCM66_0502

Alternate gene names: 227080727

Gene position: 533340-533798 (Clockwise)

Preceding gene: 227080726

Following gene: 227080728

Centisome position: 18.44

GC content: 47.71

Gene sequence:

>459_bases
ATGAGTTTCGACTTAGCCACTTGCCGACAAAGTGCCTTACAACTTCTGAGCCGTCGCGATCATAGCGAATATGAGCTATA
CCAAAAATTAGCCCTCAAAGGTCATCCTGCTGAAGTGATTGATGAGGTTGTGAAGTACGTTTTAGAGCTAGGGTATTTGA
GTGATGCCCGTTACGCAGCGAGTCAGGCTCGACAAATCGTTCATAAAGGTTACGGTGAGCAGCGTTTGCGCCAGCAACTC
AAAGAAAAGCGGGTTGCGGAAGAGGTGATTGAGCAAGCCCTCGCCGAGCAAACGATAGATTGGTTTGAACTAGCGAAAGA
GGTCGCACACAAGAAATTCAAAAGCGGCATCAGCCACGAGCGCTCGCAATACGCCAAACAAGTTCGGTACTTACAGTACC
GTGGTTTCAACTTTGAGCAAATTCGTTATGCGCTTCAAGCCAGTGAGAGTGATGAGTAA

Upstream 100 bases:

>100_bases
TCAATCTCGATGTTGATGAAGCCCTGCAATGCAGGGCTTCTTTTTGGCTGCCAATTGAGTGAGTGACTCAAAACTCACCG
TTAGCCTAATAGGGAGTTCC

Downstream 100 bases:

>100_bases
TCGCTTTCACCCTCTACATTCCGCTTATTAATCTCGCTCTGGATTTTATGCATCTTGGTTGAGCTGCCGCTCGCCACACA
TTCAGTTTGCGGAAGAGAAG

Product: recombination regulator RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSFDLATCRQSALQLLSRRDHSEYELYQKLALKGHPAEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQL
KEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE

Sequences:

>Translated_152_residues
MSFDLATCRQSALQLLSRRDHSEYELYQKLALKGHPAEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQL
KEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE
>Mature_151_residues
SFDLATCRQSALQLLSRRDHSEYELYQKLALKGHPAEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQLK
EKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

Organism=Escherichia coli, GI1789050, Length=140, Percent_Identity=37.1428571428571, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 17816; Mature: 17685

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDLATCRQSALQLLSRRDHSEYELYQKLALKGHPAEVIDEVVKYVLELGYLSDARYAA
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SQARQIVHKGYGEQRLRQQLKEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RSQYAKQVRYLQYRGFNFEQIRYALQASESDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFDLATCRQSALQLLSRRDHSEYELYQKLALKGHPAEVIDEVVKYVLELGYLSDARYAA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SQARQIVHKGYGEQRLRQQLKEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RSQYAKQVRYLQYRGFNFEQIRYALQASESDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA