| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is folA [H]
Identifier: 227080651
GI number: 227080651
Start: 454525
End: 455022
Strand: Direct
Name: folA [H]
Synonym: VCM66_0425
Alternate gene names: 227080651
Gene position: 454525-455022 (Clockwise)
Preceding gene: 227080650
Following gene: 227080658
Centisome position: 15.71
GC content: 50.2
Gene sequence:
>498_bases ATGATGATCAGTATGATTGCCGCGATGGCAGACCAGCGCATTATTGGTAAAGATAACCAGATGCCTTGGCATCTACCGGC TGATTTCGCGTGGTTCAAACGCTGTACATTAGGTAAGCCTGTAGTGATGGGGCGTAAAACCTACCAATCGATCGGACGTC CTTTACCGGGGCGGCACAATATTGTGATCTCCCGTGATGCGAGTTTGCAGATTGAGGGGGTGGATGTGGTGACCTCCATT GAGGCGGCGCTGGCGAAAGCGGGTGAGGTCGACGAGGTGATGATCATCGGAGGTGGTAGCTTGTATGCGGCCTGTTTGCC GATGGCCCATAAACTGTATATTACCGAGATCCATGCAAAATTGGATGGTGATACTCAGTTTCCTGAATGGGGGAGTGATT GGCTAGAGCGCTCTCGTGAGCATTATCCTGCCGATGAAAAAAATGCCTACGGGATGGATTTTGTGATTTTTGAACGCCAA TATCCCCTTCCTACTTGA
Upstream 100 bases:
>100_bases CCTTAAAGCCATGTTTATCATTGCGGGTTTGGCGGTTGGCCTTGCTGTACCTGGACTGTTATTCTACCGCCGCAAACCGA TTATTTAAGGTAAGAGAAAA
Downstream 100 bases:
>100_bases TGTGCAGCAGTGTTGGCTGCGCAAATTGGTTCTAGACACATTTGTCACTTATTTTGCCGCCTACCTGCAACTCCAAGTCG TTTGGGGATCGTCATTGCAG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIVISRDASLQIEGVDVVTSI EAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAKLDGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQ YPLPT
Sequences:
>Translated_165_residues MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIVISRDASLQIEGVDVVTSI EAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAKLDGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQ YPLPT >Mature_165_residues MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIVISRDASLQIEGVDVVTSI EAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAKLDGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQ YPLPT
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=147, Percent_Identity=36.0544217687075, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI1786233, Length=160, Percent_Identity=51.25, Blast_Score=165, Evalue=1e-42, Organism=Drosophila melanogaster, GI116008026, Length=182, Percent_Identity=31.8681318681319, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647458, Length=182, Percent_Identity=31.8681318681319, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18525; Mature: 18525
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHN CHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCC IVISRDASLQIEGVDVVTSIEAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAK EEEECCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHEEEEEEEEE LDGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQYPLPT CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHN CHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCC IVISRDASLQIEGVDVVTSIEAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAK EEEECCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHEEEEEEEEE LDGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQYPLPT CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]