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The map label for this gene is mshN

Identifier: 227080615

GI number: 227080615

Start: 414942

End: 416111

Strand: Direct

Name: mshN

Synonym: VCM66_0389

Alternate gene names: NA

Gene position: 414942-416111 (Clockwise)

Preceding gene: 227080614

Following gene: 227080616

Centisome position: 14.35

GC content: 50.43

Gene sequence:

>1170_bases
GTGGGGATGGAGCAAACCATGAGTGTGGTGAATGAAGCATTAGCAAAGAGTGCGCAGCGAAGTCACTCACGCCTTTCGAA
TATTGAGCGGATTGATGTTGCAAAGCCGAAAGCTCGTCCAGCGTGGTTATGGGTGATGCTAGGTTTTGGCGTGAGTCTTG
CCGTTGGTGGTTGGTCTATCTCATTGCAATCGGTGGATACTATTCCGTCGTCAGCGGAGGTTGTGCGGCCAGAAGTGCCG
TCACCGACCCAAAAGACCACACAGCAAAGTATCGCCTTATATCAAGCACCGGTTAACAGCGAAGCTTTGGTTAAGAATGA
AACTTTGGTCCAAAAAGAAACGTTGCCCAAGAACGAAACTAGTGTCAAAAACGCAGTACTTGCTAAGGTAGAAGGCTCAC
CCACCTCACTCAAGCAGACTGCGAATCGTCAGCGAGAGCAAACCGCGCTAGGGTCTGAGCTAAACGCAGAACCAGTTCTG
AATCTTGTCGATAATTCAGAGCCGAGCTTTTTCGAAGAAGAGGTCTCAAGCTTACCGAGCTCATCGCCGGTGATGATCGT
AGAGCAAGTCTCATTAACGCCGGAACAGTTAGCGCAAAAAGCCCTGCAACGCGCGCAAAAAGCGATGGAAAGTAATGAGT
TACAGACGGCGGTCTCCGCCTACACGGAAGCGCTGCGTTATACCCCGCATGATGAAATGGCCAGGCAAAAACTGGCGGCA
CTCTATTATGGCAAAGGCGATGGGCGCAAAGCGTTTGATCTGATGCAAGCCGGGATTGAACGTAATCCTGACGGTGAAGT
ACTGCGTTTGGCGCTCGCTAAGTTACTGGTCAAAGAAAAGCAAGAGGCCTCGGCTTTGGTACCTTTGGCTTATCTTCCTT
CGCAGCCCTCGATTGAGTATCTGTCACTGCGTGCTGCTCTCGCGCAGAAAACCAAACAAGATGAGATCGCGCGAGAAAGC
TATCAGCAACTGACGGAAAAAGATCCCAATAATGGCCGTTGGTGGCTGGGGTTGGCGATTCAACAAGAGCGCGCTCTGCA
ATGGCCGGCGGCGCAGCACGCCTATCAACAGGCTCTCAATAAAGTCGGATTATCCAGTCAATCACAAGCTTTTATTCATC
AACGCTTGCAATTACTGGCCAGTTTAGAGGAGACACAAAGTGCCAATTAA

Upstream 100 bases:

>100_bases
CTTGGCATGAGCAGAGCCCGTTGGTCAATCAACATCATCTTTTTGCAGCGATTCATGACACCTATGACAGCTGCAAACCA
AGATTTAAAACCCCAATTTT

Downstream 100 bases:

>100_bases
TAAACTGCGTAAACGGCTTGGTGACTTGCTGGTTGAAGAGGGGATTGTGAGCGAAGCGCAGCTTGAACAAGCGCTCAATG
CCCAGAAAAATACCGGACGC

Product: MSHA biogenesis protein MshN

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshN; Msha Biogenesis Protein Mshn; TPR Domain-Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin D; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MGMEQTMSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPAWLWVMLGFGVSLAVGGWSISLQSVDTIPSSAEVVRPEVP
SPTQKTTQQSIALYQAPVNSEALVKNETLVQKETLPKNETSVKNAVLAKVEGSPTSLKQTANRQREQTALGSELNAEPVL
NLVDNSEPSFFEEEVSSLPSSSPVMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQKLAA
LYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQEASALVPLAYLPSQPSIEYLSLRAALAQKTKQDEIARES
YQQLTEKDPNNGRWWLGLAIQQERALQWPAAQHAYQQALNKVGLSSQSQAFIHQRLQLLASLEETQSAN

Sequences:

>Translated_389_residues
MGMEQTMSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPAWLWVMLGFGVSLAVGGWSISLQSVDTIPSSAEVVRPEVP
SPTQKTTQQSIALYQAPVNSEALVKNETLVQKETLPKNETSVKNAVLAKVEGSPTSLKQTANRQREQTALGSELNAEPVL
NLVDNSEPSFFEEEVSSLPSSSPVMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQKLAA
LYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQEASALVPLAYLPSQPSIEYLSLRAALAQKTKQDEIARES
YQQLTEKDPNNGRWWLGLAIQQERALQWPAAQHAYQQALNKVGLSSQSQAFIHQRLQLLASLEETQSAN
>Mature_388_residues
GMEQTMSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPAWLWVMLGFGVSLAVGGWSISLQSVDTIPSSAEVVRPEVPS
PTQKTTQQSIALYQAPVNSEALVKNETLVQKETLPKNETSVKNAVLAKVEGSPTSLKQTANRQREQTALGSELNAEPVLN
LVDNSEPSFFEEEVSSLPSSSPVMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQKLAAL
YYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQEASALVPLAYLPSQPSIEYLSLRAALAQKTKQDEIARESY
QQLTEKDPNNGRWWLGLAIQQERALQWPAAQHAYQQALNKVGLSSQSQAFIHQRLQLLASLEETQSAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42854; Mature: 42723

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMEQTMSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPAWLWVMLGFGVSLAVGGWSI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCHHEEECCEEE
SLQSVDTIPSSAEVVRPEVPSPTQKTTQQSIALYQAPVNSEALVKNETLVQKETLPKNET
EECHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHCCCCCHH
SVKNAVLAKVEGSPTSLKQTANRQREQTALGSELNAEPVLNLVDNSEPSFFEEEVSSLPS
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHCCC
SSPVMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQKLAA
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQEASALVPLAYLPSQPSIEY
HHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHH
LSLRAALAQKTKQDEIARESYQQLTEKDPNNGRWWLGLAIQQERALQWPAAQHAYQQALN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHCCCHHHHHHHHHHH
KVGLSSQSQAFIHQRLQLLASLEETQSAN
HHCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GMEQTMSVVNEALAKSAQRSHSRLSNIERIDVAKPKARPAWLWVMLGFGVSLAVGGWSI
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCHHEEECCEEE
SLQSVDTIPSSAEVVRPEVPSPTQKTTQQSIALYQAPVNSEALVKNETLVQKETLPKNET
EECHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHCCCCCHH
SVKNAVLAKVEGSPTSLKQTANRQREQTALGSELNAEPVLNLVDNSEPSFFEEEVSSLPS
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHCCC
SSPVMIVEQVSLTPEQLAQKALQRAQKAMESNELQTAVSAYTEALRYTPHDEMARQKLAA
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LYYGKGDGRKAFDLMQAGIERNPDGEVLRLALAKLLVKEKQEASALVPLAYLPSQPSIEY
HHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHH
LSLRAALAQKTKQDEIARESYQQLTEKDPNNGRWWLGLAIQQERALQWPAAQHAYQQALN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHCCCHHHHHHHHHHH
KVGLSSQSQAFIHQRLQLLASLEETQSAN
HHCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA