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The map label for this gene is mshM [H]

Identifier: 227080614

GI number: 227080614

Start: 414118

End: 414963

Strand: Direct

Name: mshM [H]

Synonym: VCM66_0388

Alternate gene names: 227080614

Gene position: 414118-414963 (Clockwise)

Preceding gene: 227080613

Following gene: 227080615

Centisome position: 14.32

GC content: 50.0

Gene sequence:

>846_bases
ATGTATTTATCGCACTTTGGCCTTGAACAGTTACCTTTTCATCTGACTCCGGATACCGAATTGTTTCTGGGGCTCGCACC
GCACTTTGAGGCGATTCAAACCTTAAGTGCGGCGATTGAGATGGGGGAAGGTGTCAGCAAGCTCACTGGAGAAGTCGGTA
CTGGAAAAACCATGGTCTGCCGCATGCTGTTGACGCACTTAGGCGATGAGGTGGCGCTGATTTATCTGCCGAATCCTATG
CTGAGCGGCGAAGAATTAAGGCAGGCGGTCGCCGCGGAATTACAGTTGGATGTAGCATCGCCCGTGCGAGTGGTCGAGCA
GATCCAAACACGACTGATTGAGCTTCACCAACAAGGTAAACGTGTGGTTGCTTTGGTCGATGAAGCGCAGGCGTTGTCTG
ATGAGGCGCTAGAAACTTTGCGCTTATTTGGCAACTTAGAAACGGAACAAACTAAGCTGCTGCAGATTGTCTTAATTGGG
CAACCTGAACTCGATGTTCGACTCGCGCAGCATCACTTGCGTCAGTTTCGGCAGCGGATCACTTTTAACGCCAATTTGCG
CCCGTTAACTCAAGCTGAAACCGAGGTGTACATTGAGAGCCGTTTACAGAAAGCCCAAGCGCCGTATCCGCTGTTCAATG
CGACCCTGAAAAAAGCCGTCTGGCGTGCATCACAAGGGATCCCGCGTTTGATCAATCAAATTTGTCATAAGGCGCTGTTA
CTCGCTTGGCATGAGCAGAGCCCGTTGGTCAATCAACATCATCTTTTTGCAGCGATTCATGACACCTATGACAGCTGCAA
ACCAAGATTTAAAACCCCAATTTTGTGGGGATGGAGCAAACCATGA

Upstream 100 bases:

>100_bases
TTGCTCAAGCCGACGGTCGTTGGGGTAAATACTTGGCAAAAAGAGCTGGAGCGCTCGCGCAGTTTGCTACAGGAATGGTT
CCCGGATAGTCAATAAGCGT

Downstream 100 bases:

>100_bases
GTGTGGTGAATGAAGCATTAGCAAAGAGTGCGCAGCGAAGTCACTCACGCCTTTCGAATATTGAGCGGATTGATGTTGCA
AAGCCGAAAGCTCGTCCAGC

Product: MSHA biogenesis protein MshM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVCRMLLTHLGDEVALIYLPNPM
LSGEELRQAVAAELQLDVASPVRVVEQIQTRLIELHQQGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIG
QPELDVRLAQHHLRQFRQRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHKALL
LAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKTPILWGWSKP

Sequences:

>Translated_281_residues
MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVCRMLLTHLGDEVALIYLPNPM
LSGEELRQAVAAELQLDVASPVRVVEQIQTRLIELHQQGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIG
QPELDVRLAQHHLRQFRQRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHKALL
LAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKTPILWGWSKP
>Mature_281_residues
MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVCRMLLTHLGDEVALIYLPNPM
LSGEELRQAVAAELQLDVASPVRVVEQIQTRLIELHQQGKRVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIG
QPELDVRLAQHHLRQFRQRITFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHKALL
LAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKTPILWGWSKP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exeA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 31751; Mature: 31751

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC
CCCCCCCHHHCCEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH
RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVASPVRVVEQIQTRLIELHQQGK
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
RVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFRQRI
EEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHC
TFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHKALL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKTPILWGWSKP
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCC
>Mature Secondary Structure
MYLSHFGLEQLPFHLTPDTELFLGLAPHFEAIQTLSAAIEMGEGVSKLTGEVGTGKTMVC
CCCCCCCHHHCCEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH
RMLLTHLGDEVALIYLPNPMLSGEELRQAVAAELQLDVASPVRVVEQIQTRLIELHQQGK
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
RVVALVDEAQALSDEALETLRLFGNLETEQTKLLQIVLIGQPELDVRLAQHHLRQFRQRI
EEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHC
TFNANLRPLTQAETEVYIESRLQKAQAPYPLFNATLKKAVWRASQGIPRLINQICHKALL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LAWHEQSPLVNQHHLFAAIHDTYDSCKPRFKTPILWGWSKP
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961440 [H]