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The map label for this gene is secE [H]

Identifier: 227080534

GI number: 227080534

Start: 321445

End: 321840

Strand: Direct

Name: secE [H]

Synonym: VCM66_0306

Alternate gene names: 227080534

Gene position: 321445-321840 (Clockwise)

Preceding gene: 227080533

Following gene: 227080535

Centisome position: 11.11

GC content: 48.48

Gene sequence:

>396_bases
GTGACAGGTTGGTTTATGAAAGCAAACAACGCTGAAGCTCCTGATAGCTCAAATGCAGCAGACACTCTAAAGTGGGTAGC
CACTTTTGTTCTGCTGGTTGCCGCTGTTGTGGGTAATTACCTGTATGGTGAACTGTCTGTGGTGGCTCGCGCCGCAGGTG
TAATTGTGTTGATTGCTGCAGCACTTGGTGTTGCTGCGACAACAACAAAAGGCAAAGAAGCGATCGTTTTTGCTCGCGAA
TCTCGCATGGAAGTTCGCAAAGTAGTTTGGCCAACACGCCAAGAAACTATGCAAACCACGCTGATCGTTTTAGCAGTAAG
TATTGTAATGGCTCTGGCGCTTTGGGGTATTGACGGCATTATGGTTCGTCTAGTGGCCTTTGCGACCGGAGTATAG

Upstream 100 bases:

>100_bases
AGAGTATTTTCTCGCTCTTTAGTATGGAATCAGCGCATTGCGTTGACCGAATGGATTTGCCCTGCAACAGCGGGGTCGTT
GTCGTCTAGAAGTCAGATAT

Downstream 100 bases:

>100_bases
TAGAGGGTTTAATACATGAGTGAAGCTCCCAAAAAACGCTGGTATGTAGTTCAAGCCTTCTCGGGATTTGAAGGACGTGT
TGCTCAGTCACTTCGTGAAC

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTGWFMKANNAEAPDSSNAADTLKWVATFVLLVAAVVGNYLYGELSVVARAAGVIVLIAAALGVAATTTKGKEAIVFARE
SRMEVRKVVWPTRQETMQTTLIVLAVSIVMALALWGIDGIMVRLVAFATGV

Sequences:

>Translated_131_residues
MTGWFMKANNAEAPDSSNAADTLKWVATFVLLVAAVVGNYLYGELSVVARAAGVIVLIAAALGVAATTTKGKEAIVFARE
SRMEVRKVVWPTRQETMQTTLIVLAVSIVMALALWGIDGIMVRLVAFATGV
>Mature_130_residues
TGWFMKANNAEAPDSSNAADTLKWVATFVLLVAAVVGNYLYGELSVVARAAGVIVLIAAALGVAATTTKGKEAIVFARES
RMEVRKVVWPTRQETMQTTLIVLAVSIVMALALWGIDGIMVRLVAFATGV

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=122, Percent_Identity=59.0163934426229, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13899; Mature: 13767

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGWFMKANNAEAPDSSNAADTLKWVATFVLLVAAVVGNYLYGELSVVARAAGVIVLIAA
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGVAATTTKGKEAIVFARESRMEVRKVVWPTRQETMQTTLIVLAVSIVMALALWGIDGI
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
MVRLVAFATGV
HHHHHHHHHCC
>Mature Secondary Structure 
TGWFMKANNAEAPDSSNAADTLKWVATFVLLVAAVVGNYLYGELSVVARAAGVIVLIAA
CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGVAATTTKGKEAIVFARESRMEVRKVVWPTRQETMQTTLIVLAVSIVMALALWGIDGI
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
MVRLVAFATGV
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]