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The map label for this gene is yhiR [H]

Identifier: 227080409

GI number: 227080409

Start: 176898

End: 177737

Strand: Reverse

Name: yhiR [H]

Synonym: VCM66_0175

Alternate gene names: 227080409

Gene position: 177737-176898 (Counterclockwise)

Preceding gene: 227080413

Following gene: 227080408

Centisome position: 6.14

GC content: 52.02

Gene sequence:

>840_bases
TTGTTAAGTTACCGACACAGTTTCCACGCAGGCAATCATGCGGATGTGCTCAAGCACATCGTACAGAGCCTGATCCTCAA
TTCTCTGCAACAAAAAGAGAAACCTTTTGTCTACCATGATACTCACTCTGGCGTAGGTCGTTACGATCTGACCCATGAGT
GGTCGGAAAAAACCGGCGAATACAAGCAAGGCATTGCCCGCGTTTGGCAACAAGACAACATTCCGGCGGAGCTCGACAGC
TATCTGGATGCGATTCGCCAGCTCAATCAAGGGGAAACGCTGCGTTACTACCCGGGTTCACCTCGAGTCGCCCGCGCCCA
TCTGCGTGAGCAGGATCGCATGGTACTGACTGAGCTGCATCCAAGCGATTACCCATTGCTGGAGCAAGAGTTTCACCGCG
ATCGCCAAGTCTCTATCTATAAAGAAGATGGCTTCGCACGCCTGAAAGCCAGTTTGCCGCCGCAAGAACGCCGCGGTTTA
GTGCTGATTGACCCGCCTTATGAGCTGGCTAAAGAGTACCGCGATGTGGTGCGCGCTATCGCTCAGAGTTACAAACGCTG
GGCAACGGGTATTTATGCGATTTGGTATCCAGTGGTCAATCGCTGCGATATCGATGACATGCTAGAAGGCTTGCAAGGCT
TAGAGATTCGTAAAATCTTACAAATTGAACTCGGTGTCGCGCCAGATACCAATGAGCGCGGCATGACCGCCTCGGGCATG
ATAGTGATTAATCCGCCATGGACGCTGGAAAGCCAGATGCAGACCATTTTGCCTTTCCTCAAACAGGCGATTGCCCCCGC
TACTGGACACTATAAAGTCGAGTGGGTGGTACCGGAATAA

Upstream 100 bases:

>100_bases
AAATCGGTATATAATCGAGCCAATATTTTTGTTTCTATTACTGGACGCAAGTCAATCAGCGGTCAGTACAGCGCCCCTCA
AGCGGGTTTGAGAGTCTATT

Downstream 100 bases:

>100_bases
GCTGTTTTTGCATCAAGGCGGGTGGATTGTGACGCCCTCGCCCTGATATAAGGAATACAAGAAAAGAGCGAAGAGCATCT
TCGCCAGACATAATTGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARVWQQDNIPAELDS
YLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGL
VLIDPPYELAKEYRDVVRAIAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM
IVINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE

Sequences:

>Translated_279_residues
MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARVWQQDNIPAELDS
YLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGL
VLIDPPYELAKEYRDVVRAIAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM
IVINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE
>Mature_279_residues
MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARVWQQDNIPAELDS
YLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELHPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGL
VLIDPPYELAKEYRDVVRAIAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM
IVINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=63.2142857142857, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32273; Mature: 32273

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCH
YKQGIARVWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEECC
PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAI
CCCCCCHHHHHCCCCCEEEEECCCCEEEECCCCHHHHCCEEEECCCHHHHHHHHHHHHHH
AQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCE
IVINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCH
YKQGIARVWQQDNIPAELDSYLDAIRQLNQGETLRYYPGSPRVARAHLREQDRMVLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEECC
PSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAKEYRDVVRAI
CCCCCCHHHHHCCCCCEEEEECCCCEEEECCCCHHHHCCEEEECCCHHHHHHHHHHHHHH
AQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTASGM
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCE
IVINPPWTLESQMQTILPFLKQAIAPATGHYKVEWVVPE
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]