Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080357

Identifier: 227080357

GI number: 227080357

Start: 115856

End: 116002

Strand: Reverse

Name: 227080357

Synonym: VCM66_0121

Alternate gene names: NA

Gene position: 116002-115856 (Counterclockwise)

Preceding gene: 227080359

Following gene: 227080356

Centisome position: 4.01

GC content: 39.46

Gene sequence:

>147_bases
ATGACAGATAAAAGCCGCTTTTTGGTTATGTTTTACGCGACCATGCCAACAAAACGTGATCAATCTAACACTTCTTTCCG
GTTTGGTAAAGCGCTCTTGGAAGCACATCACACCAAACTAAACACTTATCAACACAAAACAGCATAA

Upstream 100 bases:

>100_bases
AATCCATAAGAGCCAGCGCACGCTCAATACGTTGCCGGTTTAGCTTATCAAGTCTATGGATTAAGGTCTGAGTATAAGCC
TGCAAGTTTGCTTCCCTGAT

Downstream 100 bases:

>100_bases
ATGATTACAGTGTTGTTGCAAATTGCCGTTTTGTAAGTATCGCCAAGATAATAAATGCGAGTCGAATCACACAATCAAGC
GGGAAAACGACATTCTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MTDKSRFLVMFYATMPTKRDQSNTSFRFGKALLEAHHTKLNTYQHKTA

Sequences:

>Translated_48_residues
MTDKSRFLVMFYATMPTKRDQSNTSFRFGKALLEAHHTKLNTYQHKTA
>Mature_47_residues
TDKSRFLVMFYATMPTKRDQSNTSFRFGKALLEAHHTKLNTYQHKTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5651; Mature: 5519

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKSRFLVMFYATMPTKRDQSNTSFRFGKALLEAHHTKLNTYQHKTA
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDKSRFLVMFYATMPTKRDQSNTSFRFGKALLEAHHTKLNTYQHKTA
CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA