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The map label for this gene is cyaY

Identifier: 227080359

GI number: 227080359

Start: 118655

End: 118969

Strand: Reverse

Name: cyaY

Synonym: VCM66_0123

Alternate gene names: 227080359

Gene position: 118969-118655 (Counterclockwise)

Preceding gene: 227080367

Following gene: 227080357

Centisome position: 4.11

GC content: 48.57

Gene sequence:

>315_bases
ATGAACGAAACTGAATTTCATCAACTCGTCGATAGCCAGCTAGAGCGTATAGAGGCCGCGATTGATGAGGCCGGCGCGGA
TATCGACTACGAAACGTCAGGCAATGTGATGACACTCGAGTTTGATGATGGCAGCCAAATCATCATTAACCGCCAAGAAC
CGATGCGTGAAATCTGGCTGGCCTCCAAATCAGGTGGCTACCATTTCAAATCGATTGATGGCGAATGGATCTGTTCAAAA
ACTGGGCTTGAGCTGCTCACTCTGCTCAAGCAAGAGTGTGATAAGCACGCCGATGAGCCGATTGATTGGGTTTAA

Upstream 100 bases:

>100_bases
ACAGTGCAGTGAATTTCTTTTTCATTTTGCATATCGTGCTTATTGAATCAATGCCCCCTATAATCGCACCACGATTAGGA
AAAGCAATAGGATAGATAGG

Downstream 100 bases:

>100_bases
GCACGAAAGTCGCTTAGGCATGCTGCCACTGACGCATAATAAAAAAGAGCACGATTGTGCTCTTTTTTATTGATAAGGAT
TTAGAAAACCTGAGACGTCA

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDGSQIIINRQEPMREIWLASKSGGYHFKSIDGEWICSK
TGLELLTLLKQECDKHADEPIDWV

Sequences:

>Translated_104_residues
MNETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDGSQIIINRQEPMREIWLASKSGGYHFKSIDGEWICSK
TGLELLTLLKQECDKHADEPIDWV
>Mature_104_residues
MNETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDGSQIIINRQEPMREIWLASKSGGYHFKSIDGEWICSK
TGLELLTLLKQECDKHADEPIDWV

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

Organism=Escherichia coli, GI1790239, Length=103, Percent_Identity=44.6601941747573, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_VIBC3 (A5F4I9)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F4I9
- SMR:   A5F4I9
- STRING:   A5F4I9
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A2396
- eggNOG:   COG1965
- HOGENOM:   HBG687517
- OMA:   EPLHQIW
- ProtClustDB:   PRK00446
- BioCyc:   VCHO345073:VC0395_A2396-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 11860; Mature: 11860

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDGSQIIINRQEPMREIWL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHH
ASKSGGYHFKSIDGEWICSKTGLELLTLLKQECDKHADEPIDWV
CCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNETEFHQLVDSQLERIEAAIDEAGADIDYETSGNVMTLEFDDGSQIIINRQEPMREIWL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHH
ASKSGGYHFKSIDGEWICSKTGLELLTLLKQECDKHADEPIDWV
CCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA