| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is purE
Identifier: 227080289
GI number: 227080289
Start: 49460
End: 49945
Strand: Reverse
Name: purE
Synonym: VCM66_0052
Alternate gene names: 227080289
Gene position: 49945-49460 (Counterclockwise)
Preceding gene: 227080295
Following gene: 227080288
Centisome position: 1.73
GC content: 52.88
Gene sequence:
>486_bases ATGACAGTCGGTATTATCATGGGTTCCAAGTCAGACTGGCCAACCATGAAACACGCAGCAGAAATGCTTGACCAGTTTGG TGTGGCTTACGAGACCAAAGTGGTTTCTGCGCACCGTACTCCTCATCTTTTGGCCGACTACGCCTCTAGCGCCAAAGAAC GCGGTTTACAAGTGATCATCGCTGGAGCGGGCGGCGCTGCGCATCTTCCCGGAATGACCGCCGCATTCACTAGCTTGCCA GTGTTAGGCGTGCCCGTTCAATCTCGCGCTCTGTCTGGGCTCGACTCGTTATACTCCATTGTGCAGATGCCAAAAGGCAT TGCGGTGGGTACGCTCGCCATTGGTGAAGCTGGTGCAGCGAATGCAGGATTACTTGCCGCACAAATCATCGGCATTCATA ACCCAGAAGTGATGAGTAAAGTGGAAGCTTTCCGCGCTAAGCAGACTCAATCTGTGTTGGATAACCCAAATCCGGCTGAG GAGTAA
Upstream 100 bases:
>100_bases TCAACCAGAAAAAGCAAACGTTTGCTTGAGAAAAAAATCCCCGTATAATGCGCCGCAAACGGGCTTGCTTGTCCGATAAA TAACACTGAAGGAGTTTGAG
Downstream 100 bases:
>100_bases CAGATGCGTGTGTTGGTTCTCGGCGCTGGTCAGCTGGCGCGCATGATGTCGCTCGCCGGAGCACCGCTCAATATTGAAAC GATCGCTTTTGATGTGGGTA
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTVGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVIIAGAGGAAHLPGMTAAFTSLP VLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAANAGLLAAQIIGIHNPEVMSKVEAFRAKQTQSVLDNPNPAE E
Sequences:
>Translated_161_residues MTVGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVIIAGAGGAAHLPGMTAAFTSLP VLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAANAGLLAAQIIGIHNPEVMSKVEAFRAKQTQSVLDNPNPAE E >Mature_160_residues TVGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVIIAGAGGAAHLPGMTAAFTSLPV LGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAANAGLLAAQIIGIHNPEVMSKVEAFRAKQTQSVLDNPNPAEE
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family
Homologues:
Organism=Escherichia coli, GI1786734, Length=156, Percent_Identity=65.3846153846154, Blast_Score=170, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6324702, Length=151, Percent_Identity=55.6291390728477, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURE_VIBCH (Q9KVT7)
Other databases:
- EMBL: AF459402 - EMBL: AE003852 - PIR: C82370 - RefSeq: NP_229711.1 - ProteinModelPortal: Q9KVT7 - SMR: Q9KVT7 - GeneID: 2614427 - GenomeReviews: AE003852_GR - KEGG: vch:VC0052 - TIGR: VC_0052 - HOGENOM: HBG301965 - OMA: GVVMGSS - ProtClustDB: CLSK2391028 - BRENDA: 4.1.1.21 - InterPro: IPR000031 - Gene3D: G3DSA:3.40.50.7700 - PANTHER: PTHR23046 - TIGRFAMs: TIGR01162
Pfam domain/function: PF00731 AIRC; SSF52255 AIR_carboxyl
EC number: =5.4.99.18
Molecular weight: Translated: 16645; Mature: 16514
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: BINDING 9-9 BINDING 12-12 BINDING 39-39
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVII CEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE AGAGGAAHLPGMTAAFTSLPVLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAA ECCCCCCCCCCHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC NAGLLAAQIIGIHNPEVMSKVEAFRAKQTQSVLDNPNPAEE CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TVGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVII EEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE AGAGGAAHLPGMTAAFTSLPVLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAA ECCCCCCCCCCHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC NAGLLAAQIIGIHNPEVMSKVEAFRAKQTQSVLDNPNPAEE CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301