| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ilvA [H]
Identifier: 227080264
GI number: 227080264
Start: 23256
End: 24788
Strand: Reverse
Name: ilvA [H]
Synonym: VCM66_0027
Alternate gene names: 227080264
Gene position: 24788-23256 (Counterclockwise)
Preceding gene: 227080265
Following gene: 227080263
Centisome position: 0.86
GC content: 52.32
Gene sequence:
>1533_bases ATGGGGTTAACCAATCAAACTGGCGCAGAGTATCTGCGCCAGATCTTGCGCTCTCCGGTGTATGAGGTAGCGAACGTCAC GCCATTGCAAACCATGCCGCGTCTTTCGGCGCGGATTGGTAACCAAGTGCAGATCAAACGTGAAGATCGCCAGCCAGTAC ACTCGTTTAAACTGCGCGGCGCTTACAACATGGTGTCGCACCTAACCGAAGCACAAAAAGCCGCGGGCGTAATTGCCGCT TCCGCAGGTAATCATGCCCAAGGTATGGCGCTGTCAGGAACGAAACTTGGCATCAAAACCACCATCGTCATGCCACGCAC CACGCCAGACATTAAAGTTGAAGCGGTACGCGGATTTGGCGGCGAAGTACTGCTGCATGGCAGCAATTTCGATGAAGCCA AAGCCGAAGCCGAACGTTTATCCAAAGAGCAAGGCTACACCTTTGTACCTCCGTTCGATCACCCTTTGGTGATTGCCGGT CAAGGCACGATTGGCATGGAAATGCTGCAGCAAAACGGTCATTTGGATTACATTTTTGTGCCGGTCGGTGGCGGCGGTTT AGCGGCGGGAGTGGCGGTTCTGGTCAAACAGTTGATGCCGGAGATCCAAGTCATCGCGGTTGAACCGGAAGACTCAGCCT GCCTCAAAGCAGCCTTAGATGCGGGTAAACCTGTGGTGCTGGATCAAGTCAGCATGTTTGCTGATGGTGTGGCAGTAAAA CGAATTGGCGATGAAACCTTTCGCCTTTGCCAGCAATACATTGACGGCCACGTGACGGTGTCCAGTGATGAAATCTGCGC GGCGGTGAAAGACATTTTTGAAGATACGCGCGCCATCGCTGAACCTTCTGGCGCATTGGCGCTGGCGGGACTAAAGAAAT TTGCCGAACAGCAGCAGCTCAAAGGCAAACAGTTGGGTACGGTACTTTCTGGCGCCAACACCAACTTCCACGGTTTGCGT TATGTGTCGGAGCGCTGCGAACTGGGTGAAAAACGCGAAGGCTTACTGGCGGTGACCATTCCAGAGCGCAAAGGGGCGTT TTTCGACTTCTGCCAAATTATTGGTAACCGCGCCGTCACCGAATTTAACTACCGTTACAATGATGATCAACTGGCCAATA TTTTTGTCGGTGTGCGTTTAGTCGGCGGCCCAGATGAGCTGAAATCGATCATTCACGAGCTGCGCCAATCCGGCTATCCG GTGCAAGATCTCTCGGATGATGAAATGGCCAAGCTACACATTCGCTACATGATTGGTGGTCGCCCTTCCAAACCACTGAC CGAGCGTTTGTACAGCTTTGAGTTTCCTGAATACCCCGGCGCACTGCTCAAATTCTTGAGCATGCTCGGCACCCACTGGA ACATCAGCTTGTTCAACTACCGCAACCACGGCGCAGACTACGGCCGCGTGCTGTGTGGTTTTGAACTGGATACACCAGAC CTAGTGCGCTTTTCAGAGCATTTGGTTGAACTCGGTTATCGCTATAAAGATGAAACCGATAACCCTGCGTATCGTTTCTT CCTAGCTAAATAA
Upstream 100 bases:
>100_bases CCAGCGTACCGTTTCTTTGGCGCTGAAAGCTTATGCCAGCATGGCAACCAGCGCCGACAAAGGTGCAGTGCGCGATAAGT CCAAACTTGAGGGCTAAGCC
Downstream 100 bases:
>100_bases TCTTCGCCCCACCTTATGTGGGGCTCTTTCTCTTTACCGGCGAGCCATCAGCATCGAGCGAAGTGGCCAAGGTCAAGTGT TGAAAAATCAACCATTTCAT
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MGLTNQTGAEYLRQILRSPVYEVANVTPLQTMPRLSARIGNQVQIKREDRQPVHSFKLRGAYNMVSHLTEAQKAAGVIAA SAGNHAQGMALSGTKLGIKTTIVMPRTTPDIKVEAVRGFGGEVLLHGSNFDEAKAEAERLSKEQGYTFVPPFDHPLVIAG QGTIGMEMLQQNGHLDYIFVPVGGGGLAAGVAVLVKQLMPEIQVIAVEPEDSACLKAALDAGKPVVLDQVSMFADGVAVK RIGDETFRLCQQYIDGHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKFAEQQQLKGKQLGTVLSGANTNFHGLR YVSERCELGEKREGLLAVTIPERKGAFFDFCQIIGNRAVTEFNYRYNDDQLANIFVGVRLVGGPDELKSIIHELRQSGYP VQDLSDDEMAKLHIRYMIGGRPSKPLTERLYSFEFPEYPGALLKFLSMLGTHWNISLFNYRNHGADYGRVLCGFELDTPD LVRFSEHLVELGYRYKDETDNPAYRFFLAK
Sequences:
>Translated_510_residues MGLTNQTGAEYLRQILRSPVYEVANVTPLQTMPRLSARIGNQVQIKREDRQPVHSFKLRGAYNMVSHLTEAQKAAGVIAA SAGNHAQGMALSGTKLGIKTTIVMPRTTPDIKVEAVRGFGGEVLLHGSNFDEAKAEAERLSKEQGYTFVPPFDHPLVIAG QGTIGMEMLQQNGHLDYIFVPVGGGGLAAGVAVLVKQLMPEIQVIAVEPEDSACLKAALDAGKPVVLDQVSMFADGVAVK RIGDETFRLCQQYIDGHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKFAEQQQLKGKQLGTVLSGANTNFHGLR YVSERCELGEKREGLLAVTIPERKGAFFDFCQIIGNRAVTEFNYRYNDDQLANIFVGVRLVGGPDELKSIIHELRQSGYP VQDLSDDEMAKLHIRYMIGGRPSKPLTERLYSFEFPEYPGALLKFLSMLGTHWNISLFNYRNHGADYGRVLCGFELDTPD LVRFSEHLVELGYRYKDETDNPAYRFFLAK >Mature_509_residues GLTNQTGAEYLRQILRSPVYEVANVTPLQTMPRLSARIGNQVQIKREDRQPVHSFKLRGAYNMVSHLTEAQKAAGVIAAS AGNHAQGMALSGTKLGIKTTIVMPRTTPDIKVEAVRGFGGEVLLHGSNFDEAKAEAERLSKEQGYTFVPPFDHPLVIAGQ GTIGMEMLQQNGHLDYIFVPVGGGGLAAGVAVLVKQLMPEIQVIAVEPEDSACLKAALDAGKPVVLDQVSMFADGVAVKR IGDETFRLCQQYIDGHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKFAEQQQLKGKQLGTVLSGANTNFHGLRY VSERCELGEKREGLLAVTIPERKGAFFDFCQIIGNRAVTEFNYRYNDDQLANIFVGVRLVGGPDELKSIIHELRQSGYPV QDLSDDEMAKLHIRYMIGGRPSKPLTERLYSFEFPEYPGALLKFLSMLGTHWNISLFNYRNHGADYGRVLCGFELDTPDL VRFSEHLVELGYRYKDETDNPAYRFFLAK
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=297, Percent_Identity=33.3333333333333, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI19923959, Length=272, Percent_Identity=33.8235294117647, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI33469958, Length=317, Percent_Identity=29.0220820189274, Blast_Score=103, Evalue=6e-22, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=70.6349206349206, Blast_Score=711, Evalue=0.0, Organism=Escherichia coli, GI1789505, Length=295, Percent_Identity=38.3050847457627, Blast_Score=184, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71991565, Length=344, Percent_Identity=34.0116279069767, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17537387, Length=321, Percent_Identity=34.5794392523364, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17508781, Length=269, Percent_Identity=34.2007434944238, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17535051, Length=327, Percent_Identity=24.4648318042813, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320930, Length=522, Percent_Identity=48.6590038314176, Blast_Score=468, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6322631, Length=304, Percent_Identity=36.8421052631579, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6319788, Length=288, Percent_Identity=25, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355833, Length=343, Percent_Identity=34.1107871720117, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24645328, Length=279, Percent_Identity=31.1827956989247, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56174; Mature: 56043
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTNQTGAEYLRQILRSPVYEVANVTPLQTMPRLSARIGNQVQIKREDRQPVHSFKLRG CCCCCCHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCC AYNMVSHLTEAQKAAGVIAASAGNHAQGMALSGTKLGIKTTIVMPRTTPDIKVEAVRGFG HHHHHHHHHHHHHHCCEEEECCCCCCCCEEECCCEECEEEEEEECCCCCCCEEEEEECCC GEVLLHGSNFDEAKAEAERLSKEQGYTFVPPFDHPLVIAGQGTIGMEMLQQNGHLDYIFV CEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCHHHHHHHCCCCEEEEEE PVGGGGLAAGVAVLVKQLMPEIQVIAVEPEDSACLKAALDAGKPVVLDQVSMFADGVAVK EECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHCCHHHH RIGDETFRLCQQYIDGHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKFAEQQQL HCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KGKQLGTVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERKGAFFDFCQIIGNRAVT CHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEE EFNYRYNDDQLANIFVGVRLVGGPDELKSIIHELRQSGYPVQDLSDDEMAKLHIRYMIGG EEECEECCHHHEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECC RPSKPLTERLYSFEFPEYPGALLKFLSMLGTHWNISLFNYRNHGADYGRVLCGFELDTPD CCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCHH LVRFSEHLVELGYRYKDETDNPAYRFFLAK HHHHHHHHHHHCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure GLTNQTGAEYLRQILRSPVYEVANVTPLQTMPRLSARIGNQVQIKREDRQPVHSFKLRG CCCCCHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCC AYNMVSHLTEAQKAAGVIAASAGNHAQGMALSGTKLGIKTTIVMPRTTPDIKVEAVRGFG HHHHHHHHHHHHHHCCEEEECCCCCCCCEEECCCEECEEEEEEECCCCCCCEEEEEECCC GEVLLHGSNFDEAKAEAERLSKEQGYTFVPPFDHPLVIAGQGTIGMEMLQQNGHLDYIFV CEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCHHHHHHHCCCCEEEEEE PVGGGGLAAGVAVLVKQLMPEIQVIAVEPEDSACLKAALDAGKPVVLDQVSMFADGVAVK EECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHCCHHHH RIGDETFRLCQQYIDGHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKFAEQQQL HCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KGKQLGTVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERKGAFFDFCQIIGNRAVT CHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEE EFNYRYNDDQLANIFVGVRLVGGPDELKSIIHELRQSGYPVQDLSDDEMAKLHIRYMIGG EEECEECCHHHEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECC RPSKPLTERLYSFEFPEYPGALLKFLSMLGTHWNISLFNYRNHGADYGRVLCGFELDTPD CCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCHH LVRFSEHLVELGYRYKDETDNPAYRFFLAK HHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]