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The map label for this gene is yhdH [H]

Identifier: 227080263

GI number: 227080263

Start: 22028

End: 23008

Strand: Reverse

Name: yhdH [H]

Synonym: VCM66_0026

Alternate gene names: 227080263

Gene position: 23008-22028 (Counterclockwise)

Preceding gene: 227080264

Following gene: 227080261

Centisome position: 0.8

GC content: 52.09

Gene sequence:

>981_bases
ATGTTCAACGCGTTGCTGCTTACTCAACAAGACAAAATCACTCACGCGACGGTCACTCAAATTAACGATGATCAGCTGCC
CGCAGGCAATGTGACGGTAGCGGTCAACTACTCTTCACTCAATTACAAAGATGGCCTCGCCATTACTGGCAAAGGCAAAA
TTATCCGTGAATTTCCTATGGTTCCGGGGATTGATTTTGCAGGCACAGTCTTGGAATCAGCCGATGCGCGTTATCAAGTC
GGTGATGCCGTGGTTCTGACCGGATGGGGTGTGGGTGAAAATCATTGGGGGGGCATGGCGCAAAAAGCGCGATTAAATGC
CGATTGGTTGGTGAAATTGCCACAAGGCTTAACCAGCCAGCAAGCCATGATGATTGGTACTGCAGGCTTTACCGCCATGT
TGTGTGTACAGGCGCTGATTGACGGTGGCATCAAACCGGAAGATGGCGAAATCTTAGTCACCGGAGCCAGTGGCGGTGTC
GGCTCTGTCGCCGTCACTTTACTTGCTCAGCTTGGCTATAAGGTCGTGGCGGTGACAGGACGCGTAGCACAGAATGGCCC
TCTTTTAGAACAACTCGGTGCCTCGCGCGTTATCGATCGCCAAGAATTTAGTGAAGCCTCCAGACCGCTCGAAAAACAGC
TCTGGGTTGGTGCGGTCGATACCGTAGGCAGTAAAGTGTTAGCAAAAGTGCTGGCACAAATGCACTATAACGGGGTCGTT
GCCGCTTGTGGTCTGGCAGGTGGTTTTGATCTGCCGACCACAGTCATGCCATTTATCCTGCGCAATGTACGTTTACAGGG
CGTTGACTCCGTCTCTTGCCCTGTCGAGAAACGCCTTGCTGCATGGAAGAAGCTGGCGGAGTTGTTGCCTGCAAGCTACT
ACGCTCAAGCGTGCCACGAAATCAGCTTGTCACAAGTGCCAGAATACGCCGAAGCGATTACTAATGGCCAAGTGACAGGC
CGCGTGGTCGTTAAACTCTAA

Upstream 100 bases:

>100_bases
TAGATAGGCTGGCATACTCCTCGCTTTCGCTTGGCTTTACCATCCATACCCGACTACTTGTCCATTCAGGTAGAAAAGGC
ATAACAGAGGGAAATCCCAT

Downstream 100 bases:

>100_bases
GCCAAAACGTATTGATTCGAATGGAAAGAAACCCGCACTGTTGGCGGGTTTCTCATTGTGAACCTTATCTGGTTATAAAT
AGCAGGCAAAAAAATCCCGC

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MFNALLLTQQDKITHATVTQINDDQLPAGNVTVAVNYSSLNYKDGLAITGKGKIIREFPMVPGIDFAGTVLESADARYQV
GDAVVLTGWGVGENHWGGMAQKARLNADWLVKLPQGLTSQQAMMIGTAGFTAMLCVQALIDGGIKPEDGEILVTGASGGV
GSVAVTLLAQLGYKVVAVTGRVAQNGPLLEQLGASRVIDRQEFSEASRPLEKQLWVGAVDTVGSKVLAKVLAQMHYNGVV
AACGLAGGFDLPTTVMPFILRNVRLQGVDSVSCPVEKRLAAWKKLAELLPASYYAQACHEISLSQVPEYAEAITNGQVTG
RVVVKL

Sequences:

>Translated_326_residues
MFNALLLTQQDKITHATVTQINDDQLPAGNVTVAVNYSSLNYKDGLAITGKGKIIREFPMVPGIDFAGTVLESADARYQV
GDAVVLTGWGVGENHWGGMAQKARLNADWLVKLPQGLTSQQAMMIGTAGFTAMLCVQALIDGGIKPEDGEILVTGASGGV
GSVAVTLLAQLGYKVVAVTGRVAQNGPLLEQLGASRVIDRQEFSEASRPLEKQLWVGAVDTVGSKVLAKVLAQMHYNGVV
AACGLAGGFDLPTTVMPFILRNVRLQGVDSVSCPVEKRLAAWKKLAELLPASYYAQACHEISLSQVPEYAEAITNGQVTG
RVVVKL
>Mature_326_residues
MFNALLLTQQDKITHATVTQINDDQLPAGNVTVAVNYSSLNYKDGLAITGKGKIIREFPMVPGIDFAGTVLESADARYQV
GDAVVLTGWGVGENHWGGMAQKARLNADWLVKLPQGLTSQQAMMIGTAGFTAMLCVQALIDGGIKPEDGEILVTGASGGV
GSVAVTLLAQLGYKVVAVTGRVAQNGPLLEQLGASRVIDRQEFSEASRPLEKQLWVGAVDTVGSKVLAKVLAQMHYNGVV
AACGLAGGFDLPTTVMPFILRNVRLQGVDSVSCPVEKRLAAWKKLAELLPASYYAQACHEISLSQVPEYAEAITNGQVTG
RVVVKL

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=67.0769230769231, Blast_Score=445, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34504; Mature: 34504

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNALLLTQQDKITHATVTQINDDQLPAGNVTVAVNYSSLNYKDGLAITGKGKIIREFPM
CCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEECCC
VPGIDFAGTVLESADARYQVGDAVVLTGWGVGENHWGGMAQKARLNADWLVKLPQGLTSQ
CCCCCHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCCHHHCCCCHHEEECCCCCCCC
QAMMIGTAGFTAMLCVQALIDGGIKPEDGEILVTGASGGVGSVAVTLLAQLGYKVVAVTG
CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
RVAQNGPLLEQLGASRVIDRQEFSEASRPLEKQLWVGAVDTVGSKVLAKVLAQMHYNGVV
CCCCCCCHHHHCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
AACGLAGGFDLPTTVMPFILRNVRLQGVDSVSCPVEKRLAAWKKLAELLPASYYAQACHE
EECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
ISLSQVPEYAEAITNGQVTGRVVVKL
CCHHHCHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MFNALLLTQQDKITHATVTQINDDQLPAGNVTVAVNYSSLNYKDGLAITGKGKIIREFPM
CCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEECCC
VPGIDFAGTVLESADARYQVGDAVVLTGWGVGENHWGGMAQKARLNADWLVKLPQGLTSQ
CCCCCHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCCHHHCCCCHHEEECCCCCCCC
QAMMIGTAGFTAMLCVQALIDGGIKPEDGEILVTGASGGVGSVAVTLLAQLGYKVVAVTG
CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
RVAQNGPLLEQLGASRVIDRQEFSEASRPLEKQLWVGAVDTVGSKVLAKVLAQMHYNGVV
CCCCCCCHHHHCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
AACGLAGGFDLPTTVMPFILRNVRLQGVDSVSCPVEKRLAAWKKLAELLPASYYAQACHE
EECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
ISLSQVPEYAEAITNGQVTGRVVVKL
CCHHHCHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]