| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is tusA
Identifier: 227080261
GI number: 227080261
Start: 21287
End: 21535
Strand: Reverse
Name: tusA
Synonym: VCM66_0024
Alternate gene names: 227080261
Gene position: 21535-21287 (Counterclockwise)
Preceding gene: 227080263
Following gene: 227080258
Centisome position: 0.74
GC content: 49.0
Gene sequence:
>249_bases ATGACTTTCAATCCGAACATTGCCACGCATACTTTAGAAGCAGAAGGATTACGCTGCCCAGAGCCAGTGATGATGGTCAG GAAAACCATTCGTACGATGCTAGACGGCGAAGTGTTATTGGTTACGGCCGATGACCCCTCCACCACGCGTGATATTCCCA GCTTCTGCCGCTTTATGGATCACCAATTACTCGGTGCGCAGATCGACCAACTGCCTTATCAGTACCTGATTAAAAAAGGG TTGGCCTAA
Upstream 100 bases:
>100_bases GAAGTTATAACAAAATGATCCTTTTGCCAAGCGATTATTGAATAATTTTTCTCCACCAGTATCATCTACGCCTTAATTGT GACACCCAACAGGTTTTAGC
Downstream 100 bases:
>100_bases CAAACAATCACTACCGCTAAAAGCGGTGGTTTAGGGATGACAATAAAAAAGACTGCCGAGGCAGTCTTTTTTGATAGCAA TCTGATTTACTCTTCTTCGA
Product: sulfur transfer protein SirA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTFNPNIATHTLEAEGLRCPEPVMMVRKTIRTMLDGEVLLVTADDPSTTRDIPSFCRFMDHQLLGAQIDQLPYQYLIKKG LA
Sequences:
>Translated_82_residues MTFNPNIATHTLEAEGLRCPEPVMMVRKTIRTMLDGEVLLVTADDPSTTRDIPSFCRFMDHQLLGAQIDQLPYQYLIKKG LA >Mature_81_residues TFNPNIATHTLEAEGLRCPEPVMMVRKTIRTMLDGEVLLVTADDPSTTRDIPSFCRFMDHQLLGAQIDQLPYQYLIKKGL A
Specific function: Could be part of a sulfur-relay system
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family. TusA subfamily
Homologues:
Organism=Escherichia coli, GI1789881, Length=71, Percent_Identity=69.0140845070423, Blast_Score=110, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TUSA_VIBC3 (A5F4A1)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F4A1 - SMR: A5F4A1 - STRING: A5F4A1 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A2495 - eggNOG: COG0425 - HOGENOM: HBG731190 - OMA: PEPVMLV - ProtClustDB: PRK00299 - BioCyc: VCHO345073:VC0395_A2495-MONOMER - GO: GO:0005737 - HAMAP: MF_00413 - InterPro: IPR001455 - InterPro: IPR022931 - Gene3D: G3DSA:3.30.110.40
Pfam domain/function: PF01206 SirA; SSF64307 SirA_like
EC number: NA
Molecular weight: Translated: 9279; Mature: 9148
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS01148 UPF0033
Important sites: ACT_SITE 19-19
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNPNIATHTLEAEGLRCPEPVMMVRKTIRTMLDGEVLLVTADDPSTTRDIPSFCRFMD CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH HQLLGAQIDQLPYQYLIKKGLA HHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure TFNPNIATHTLEAEGLRCPEPVMMVRKTIRTMLDGEVLLVTADDPSTTRDIPSFCRFMD CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH HQLLGAQIDQLPYQYLIKKGLA HHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA