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The map label for this gene is yidD [C]

Identifier: 227080242

GI number: 227080242

Start: 3899

End: 4156

Strand: Reverse

Name: yidD [C]

Synonym: VCM66_0005

Alternate gene names: 227080242

Gene position: 4156-3899 (Counterclockwise)

Preceding gene: 227080243

Following gene: 227080241

Centisome position: 0.14

GC content: 46.51

Gene sequence:

>258_bases
ATGGCAACGCCTCTCTCGCCCTTCTCGTGGTTAGCCATTGGTATTGTAAAACTTTACCAGTGGTTTATTAGTCCACTTAT
CGGCCCACGCTGCCGATTCACTCCTACTTGTTCCACGTATGCGATAGAAGCGCTGCGAGCTCACGGTTTTATAAAAGGAT
GTTGGTTATCCACCAAACGTCTATTAAAATGCCACCCTTTGAACGAAGGGGGCTTTGACCCCGTTCCACCAGTCCAAAAA
CAAGACAGAGATAAATAA

Upstream 100 bases:

>100_bases
TACATCAAAATCAACTGGCTAACAAAGATTTTGTTGTCATCGCCAAAAAGAGCGCGCAAGATTTGAGCAATGAAGAACTG
TTTAACTTGCTTGGCAAACT

Downstream 100 bases:

>100_bases
CGATGGATTCTCAACGTAATATCTTGTTAATCGCTCTGGCGCTGGTTTCTTTCCTACTGTTTCAACAATGGCAAGTAGCG
AAGAACCCTGCACCGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MATPLSPFSWLAIGIVKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKRLLKCHPLNEGGFDPVPPVQK
QDRDK

Sequences:

>Translated_85_residues
MATPLSPFSWLAIGIVKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKRLLKCHPLNEGGFDPVPPVQK
QDRDK
>Mature_84_residues
ATPLSPFSWLAIGIVKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKRLLKCHPLNEGGFDPVPPVQKQ
DRDK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=84, Percent_Identity=61.9047619047619, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y005_VIBCH (Q9KVY3)

Other databases:

- EMBL:   AE003852
- PIR:   F82375
- RefSeq:   NP_062589.1
- GeneID:   2612958
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC0005
- TIGR:   VC_0005
- HOGENOM:   HBG634291
- OMA:   CSEYAIE
- ProtClustDB:   CLSK2517499
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9616; Mature: 9485

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPLSPFSWLAIGIVKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LLKCHPLNEGGFDPVPPVQKQDRDK
HHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATPLSPFSWLAIGIVKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LLKCHPLNEGGFDPVPPVQKQDRDK
HHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301