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The map label for this gene is 226949294

Identifier: 226949294

GI number: 226949294

Start: 2280248

End: 2280643

Strand: Direct

Name: 226949294

Synonym: CLM_2213

Alternate gene names: NA

Gene position: 2280248-2280643 (Clockwise)

Preceding gene: 226949287

Following gene: 226949296

Centisome position: 54.88

GC content: 27.53

Gene sequence:

>396_bases
ATGAATAATAATGTAGTTAGTAGATTGAATTCTTCAAAAATAAGTAAAGCAGTAGGTAATTATACTCATATAACCAAAAT
AGATCCTAATGCAACATTTTACACATTTTCTGGACAAGTTGGAGCAAATTTAGATGGCAATTTTCCTGTGGAATTCAATA
AACAGGTAAACAACACATTTTTAAATATATCAAATCTATTAAAGAGTATAGATTTAACACCTAATAATGTTATAAAGATT
AATATCTGGGCAACAGAAGAGATTGACTGGGATTACTTTGATAAAGTATATGATGATTTTTTTGGAAAGCCTTATCCTTC
AATGACTGTTGCTTATGTAAATGCTTTAGGACTAAAAGAGATAAAATTAGAAATTGAAATATGGGCAGCAAAATAA

Upstream 100 bases:

>100_bases
TTTTCGATAAATAAATTTCTATCAATGGATAACTATATATTATAAGCAATATATAGTGGTAGAAATTATTTTATCCTAAT
ACAGAAAGGAATTAATAAAA

Downstream 100 bases:

>100_bases
TTTTATCTCATCCTCCTAAATAAAAATATTCCATTATGAGAAGGAGGTGTCTCAAAATAGTCTTAATTTTAAAACCGTAA
ATATAAAAATTAAGACTATT

Product: endoribonuclease L-PSP family protein

Products: NA

Alternate protein names: GCN5-Related N-Acetyltransferase; Endoribonuclease L-PSP Family Protein; L-PSP Family Endoribonuclease

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNNNVVSRLNSSKISKAVGNYTHITKIDPNATFYTFSGQVGANLDGNFPVEFNKQVNNTFLNISNLLKSIDLTPNNVIKI
NIWATEEIDWDYFDKVYDDFFGKPYPSMTVAYVNALGLKEIKLEIEIWAAK

Sequences:

>Translated_131_residues
MNNNVVSRLNSSKISKAVGNYTHITKIDPNATFYTFSGQVGANLDGNFPVEFNKQVNNTFLNISNLLKSIDLTPNNVIKI
NIWATEEIDWDYFDKVYDDFFGKPYPSMTVAYVNALGLKEIKLEIEIWAAK
>Mature_131_residues
MNNNVVSRLNSSKISKAVGNYTHITKIDPNATFYTFSGQVGANLDGNFPVEFNKQVNNTFLNISNLLKSIDLTPNNVIKI
NIWATEEIDWDYFDKVYDDFFGKPYPSMTVAYVNALGLKEIKLEIEIWAAK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14860; Mature: 14860

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNVVSRLNSSKISKAVGNYTHITKIDPNATFYTFSGQVGANLDGNFPVEFNKQVNNTF
CCCHHHHHCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCEE
LNISNLLKSIDLTPNNVIKINIWATEEIDWDYFDKVYDDFFGKPYPSMTVAYVNALGLKE
EEHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEHHCCCEE
IKLEIEIWAAK
EEEEEEEEECC
>Mature Secondary Structure
MNNNVVSRLNSSKISKAVGNYTHITKIDPNATFYTFSGQVGANLDGNFPVEFNKQVNNTF
CCCHHHHHCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCEE
LNISNLLKSIDLTPNNVIKINIWATEEIDWDYFDKVYDDFFGKPYPSMTVAYVNALGLKE
EEHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEHHCCCEE
IKLEIEIWAAK
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA