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The map label for this gene is ubiE [H]

Identifier: 226949004

GI number: 226949004

Start: 1968896

End: 1969531

Strand: Direct

Name: ubiE [H]

Synonym: CLM_1918

Alternate gene names: 226949004

Gene position: 1968896-1969531 (Clockwise)

Preceding gene: 226949003

Following gene: 226949006

Centisome position: 47.38

GC content: 27.52

Gene sequence:

>636_bases
ATGAAAAATTTAATGAATAAACTTTATGGACAATTTAGGAGACCTAAAGGAACGATGGGTAAATTTATTGCAAAAAGTAT
GAATAAAGAACACTTTGAAGTAACTACTTGGGGACTTGATAAATTTAAAGTAAAAGAAGACAATATTATATTAGATATAG
GTTGTGGAGGAGGAAGGACTGTAAACAGACTTGCTCATGGAGTTCCAAAAGGAAAGGTCTTTGGCATGGATTATTCTTTA
GATTGTGTAAATTTTTCTAAAAAATATAACAAAGATTTAATAGAAAATGGCAAAGTAGAAATTATTCATGGTAGTGTAGA
TAAAATGCCCTTTGAAGATAATAAATTTGATATTATATCTGCAGTAGAAACTACATATTTTTGGCCAAATTTATTAGATA
GTTTTAAGGAAGTAAAAAGAGTACTAAAACCTTCAGGAAAGTTTATTATAGTAAATGCTAGTTATACTAATGAAAAATTT
AAAGAAAGAAATGAAGAATATCTAAGAAAAGTACCAGGTATGAAAATATATAGTGTGGATTATATAAAAAACTTATTAGA
AGAAGTGGGATATAATAATATATCCATAGAGACCTTAGAAGAGGAAAATTGGCTATGTGCCATAGGAGAAAAATAG

Upstream 100 bases:

>100_bases
TTATGTAGTATTAGGAAACGGTTTATATAATTACAATTCTGAATAGAATTATATTACAGGAATCAAAAAAATACAATTTT
TTTATAGAAAGGGGTACATT

Downstream 100 bases:

>100_bases
AAACATCCTCTTTAGGCTCTACTGTTTCATTTAAATGATAAACACTATTGATAAATTTAGTATTATTAGAAAGATAGTGT
ATCAAAAATAAATCTATTTT

Product: UbiE/COQ5 family methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKNLMNKLYGQFRRPKGTMGKFIAKSMNKEHFEVTTWGLDKFKVKEDNIILDIGCGGGRTVNRLAHGVPKGKVFGMDYSL
DCVNFSKKYNKDLIENGKVEIIHGSVDKMPFEDNKFDIISAVETTYFWPNLLDSFKEVKRVLKPSGKFIIVNASYTNEKF
KERNEEYLRKVPGMKIYSVDYIKNLLEEVGYNNISIETLEEENWLCAIGEK

Sequences:

>Translated_211_residues
MKNLMNKLYGQFRRPKGTMGKFIAKSMNKEHFEVTTWGLDKFKVKEDNIILDIGCGGGRTVNRLAHGVPKGKVFGMDYSL
DCVNFSKKYNKDLIENGKVEIIHGSVDKMPFEDNKFDIISAVETTYFWPNLLDSFKEVKRVLKPSGKFIIVNASYTNEKF
KERNEEYLRKVPGMKIYSVDYIKNLLEEVGYNNISIETLEEENWLCAIGEK
>Mature_211_residues
MKNLMNKLYGQFRRPKGTMGKFIAKSMNKEHFEVTTWGLDKFKVKEDNIILDIGCGGGRTVNRLAHGVPKGKVFGMDYSL
DCVNFSKKYNKDLIENGKVEIIHGSVDKMPFEDNKFDIISAVETTYFWPNLLDSFKEVKRVLKPSGKFIIVNASYTNEKF
KERNEEYLRKVPGMKIYSVDYIKNLLEEVGYNNISIETLEEENWLCAIGEK

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25143945, Length=171, Percent_Identity=28.6549707602339, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014122
- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: NA

Molecular weight: Translated: 24374; Mature: 24374

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLMNKLYGQFRRPKGTMGKFIAKSMNKEHFEVTTWGLDKFKVKEDNIILDIGCGGGRT
CHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEECCCCHH
VNRLAHGVPKGKVFGMDYSLDCVNFSKKYNKDLIENGKVEIIHGSVDKMPFEDNKFDIIS
HHHHHHCCCCCEEEECCCEEEHCCHHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCHHHH
AVETTYFWPNLLDSFKEVKRVLKPSGKFIIVNASYTNEKFKERNEEYLRKVPGMKIYSVD
HHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEHH
YIKNLLEEVGYNNISIETLEEENWLCAIGEK
HHHHHHHHCCCCCEEEEEEECCCEEEEECCC
>Mature Secondary Structure
MKNLMNKLYGQFRRPKGTMGKFIAKSMNKEHFEVTTWGLDKFKVKEDNIILDIGCGGGRT
CHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEECCCCHH
VNRLAHGVPKGKVFGMDYSLDCVNFSKKYNKDLIENGKVEIIHGSVDKMPFEDNKFDIIS
HHHHHHCCCCCEEEECCCEEEHCCHHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCHHHH
AVETTYFWPNLLDSFKEVKRVLKPSGKFIIVNASYTNEKFKERNEEYLRKVPGMKIYSVD
HHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEHH
YIKNLLEEVGYNNISIETLEEENWLCAIGEK
HHHHHHHHCCCCCEEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]