Click here to switch to the map view.

The map label for this gene is ypuA [H]

Identifier: 226949003

GI number: 226949003

Start: 1967675

End: 1968625

Strand: Direct

Name: ypuA [H]

Synonym: CLM_1917

Alternate gene names: 226949003

Gene position: 1967675-1968625 (Clockwise)

Preceding gene: 226949001

Following gene: 226949004

Centisome position: 47.35

GC content: 29.34

Gene sequence:

>951_bases
ATGAAATGCAAAACAGTGATTAGTAAATTATTAGTTTTAGTGTTTACTTTTTCTTTAATAATATCTGCTTCTTCGGCCAA
TAAAGTTTATGCAGATGCTTTTAAAGTGGTTACGTTAGGGGCAGATTTAACTAATGAACAAAAGGAAGAAATGCTTAAGT
ATTTTGGAGTAACAAGAAAAGAAGCTAATGTAATGGAGGTTAACAAAGAAGAAGAAGATAAGTATTTAGCTGGAGTGGCT
ACAAGAAAACAAATAGGAACAAAATCTATATCCTGTGCCTATGTAGAACCTACAGATAAGGGTGGGCTAAACATATCTAC
TCATAATATATATTGGGTTACGGAAAATATGATTAGAAATGCTTTAATAACTGCAGGAGTAGAAAATGCTAATGTCAAAG
TAGGAGCACCTTTTAACGTATCTGGTACAGCAGCTCTTACAGGTATATTAAAAGGTTTTGAAAGTAGTAAAGGCGGAAAA
AAAATAGATGAAGAGAAGAAGAAAGTTGCTAACGAAGAGATGGTTGTTACTGGTAATTTAGGAGAAAAAATAGGACAAGA
TGAAGCAGCTAACTTAATAAATGAAGTTAAAAAAGAGGTTGTTAAGGAAAAACCAAAAACAGAAAAAGAAATAAAAAATA
TAGTAAAAGATGCAACTAATAATTATGGTTATAAATTAAGTGATGAAGATATGCAAAAGATAACATCTCTAATGGATAAG
ATAAATGGATTAGATTTAGACTTTAAGCAGATAAAAGACCAGCTAAATCAGGTTAGTAATAAATTAAAAGATGTTGTAAC
TAGCGAAGAAGCAAAAGGTTTCTTTAGTAAGCTATGGGAAGGTATTAAGGATTTCTTTGATAATATTTTTAGTAGCAATA
AAGAAGAAAAAACTACATCTTATAATGTAACAAAAGTTCAAAATATAACTTATAATAAGTTGAGAATATAA

Upstream 100 bases:

>100_bases
ATAATATATGATGATAATATAAATCTATCCTATTTATGAAATTAGCAGTATTTATAGGTTTATATATCACTACACATAAA
GTATAAAGGAGACTGAAAAT

Downstream 100 bases:

>100_bases
TTTATTTGTAACTTAAAAATATATAAAAAAATGTAGCAGTTAAATTTTTAGATTACTTTTATTTTGTAAAATTATAAAGC
AGCCTCTATGAGTGAATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX19 [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKCKTVISKLLVLVFTFSLIISASSANKVYADAFKVVTLGADLTNEQKEEMLKYFGVTRKEANVMEVNKEEEDKYLAGVA
TRKQIGTKSISCAYVEPTDKGGLNISTHNIYWVTENMIRNALITAGVENANVKVGAPFNVSGTAALTGILKGFESSKGGK
KIDEEKKKVANEEMVVTGNLGEKIGQDEAANLINEVKKEVVKEKPKTEKEIKNIVKDATNNYGYKLSDEDMQKITSLMDK
INGLDLDFKQIKDQLNQVSNKLKDVVTSEEAKGFFSKLWEGIKDFFDNIFSSNKEEKTTSYNVTKVQNITYNKLRI

Sequences:

>Translated_316_residues
MKCKTVISKLLVLVFTFSLIISASSANKVYADAFKVVTLGADLTNEQKEEMLKYFGVTRKEANVMEVNKEEEDKYLAGVA
TRKQIGTKSISCAYVEPTDKGGLNISTHNIYWVTENMIRNALITAGVENANVKVGAPFNVSGTAALTGILKGFESSKGGK
KIDEEKKKVANEEMVVTGNLGEKIGQDEAANLINEVKKEVVKEKPKTEKEIKNIVKDATNNYGYKLSDEDMQKITSLMDK
INGLDLDFKQIKDQLNQVSNKLKDVVTSEEAKGFFSKLWEGIKDFFDNIFSSNKEEKTTSYNVTKVQNITYNKLRI
>Mature_316_residues
MKCKTVISKLLVLVFTFSLIISASSANKVYADAFKVVTLGADLTNEQKEEMLKYFGVTRKEANVMEVNKEEEDKYLAGVA
TRKQIGTKSISCAYVEPTDKGGLNISTHNIYWVTENMIRNALITAGVENANVKVGAPFNVSGTAALTGILKGFESSKGGK
KIDEEKKKVANEEMVVTGNLGEKIGQDEAANLINEVKKEVVKEKPKTEKEIKNIVKDATNNYGYKLSDEDMQKITSLMDK
INGLDLDFKQIKDQLNQVSNKLKDVVTSEEAKGFFSKLWEGIKDFFDNIFSSNKEEKTTSYNVTKVQNITYNKLRI

Specific function: Unknown

COG id: COG4086

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009343 [H]

Pfam domain/function: PF06207 DUF1002 [H]

EC number: NA

Molecular weight: Translated: 35217; Mature: 35217

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKTVISKLLVLVFTFSLIISASSANKVYADAFKVVTLGADLTNEQKEEMLKYFGVTRK
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCC
EANVMEVNKEEEDKYLAGVATRKQIGTKSISCAYVEPTDKGGLNISTHNIYWVTENMIRN
CCCHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECEEEEEEHHHHHH
ALITAGVENANVKVGAPFNVSGTAALTGILKGFESSKGGKKIDEEKKKVANEEMVVTGNL
HHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCC
GEKIGQDEAANLINEVKKEVVKEKPKTEKEIKNIVKDATNNYGYKLSDEDMQKITSLMDK
HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHH
INGLDLDFKQIKDQLNQVSNKLKDVVTSEEAKGFFSKLWEGIKDFFDNIFSSNKEEKTTS
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
YNVTKVQNITYNKLRI
CCEEEECCCCHHHCCC
>Mature Secondary Structure
MKCKTVISKLLVLVFTFSLIISASSANKVYADAFKVVTLGADLTNEQKEEMLKYFGVTRK
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCC
EANVMEVNKEEEDKYLAGVATRKQIGTKSISCAYVEPTDKGGLNISTHNIYWVTENMIRN
CCCHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECEEEEEEHHHHHH
ALITAGVENANVKVGAPFNVSGTAALTGILKGFESSKGGKKIDEEKKKVANEEMVVTGNL
HHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCC
GEKIGQDEAANLINEVKKEVVKEKPKTEKEIKNIVKDATNNYGYKLSDEDMQKITSLMDK
HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHH
INGLDLDFKQIKDQLNQVSNKLKDVVTSEEAKGFFSKLWEGIKDFFDNIFSSNKEEKTTS
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
YNVTKVQNITYNKLRI
CCEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1368705; 8022278 [H]