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The map label for this gene is 226948470

Identifier: 226948470

GI number: 226948470

Start: 1419998

End: 1421626

Strand: Direct

Name: 226948470

Synonym: CLM_1356

Alternate gene names: NA

Gene position: 1419998-1421626 (Clockwise)

Preceding gene: 226948469

Following gene: 226948471

Centisome position: 34.17

GC content: 30.82

Gene sequence:

>1629_bases
ATGTATTATGGTAATAAAATTTTAAAAAAATATGGAAATTTTATTTTATCTCTAGTGTTAGCTTTTGCTTTAAGTCTGTG
TTTTACATTTAAAGCTTTTGCAGCAAATATGAGCCCTGATTATAAATGTTGTGTAATGGGCCCATTAGAGAAAGTGGATA
ATTGGAGTGATTTTAAGAAGCAATTAATAACTCTTAAAAATAATGGAGTTTACGCTATTACTACAGATGTATGGTGGGGA
TATGTCGAAAGTGAAGGTGATAATAAGTTTGACTGGAGTTACTACAAAACTTATGGGGATACTGTTCGTGCTGCAGGATT
AAAGTGGATACCTATTATATCAACTCATGAATGTGGTAGTAATGTAGGTGATTCTGTAAATATACCTTTGCCTTCATGGT
TATGGGAAAAAGATACTGCTGATAACATGAAATTTAAGGATGAAAATGGAGTTTATAACAAAGAGACTCTTAGTCCATGG
TGGTCTGATACAATTAAACAGTATGATGAGCTTTATGAATCATTTGCCTCAAATTTTAGTTCATATAAAGATATTATAGC
AAAAATATATCTTTCATCTGGACCAGCAGGTGAATTAAGATTTCCATCTTATAATCCATCAACAGGCTGGTCTCGTGGAT
TTTTACAATGTTATACTAAAGCAGCTAAATTAGATTTCCAAAATGCTATGAAAAATAAATATGATACTATATCTAGACTT
AATAGTGAATGGGGAACAAGCTTAAAGAGCTTTGAACAAGTCAGTCCTCCAACTGATGGAGACAATTTTTTTGTAAATGG
ATATAAAACAAACTATGGCAATGATTTCTTAACTTGGTATCAAGGTGTGCTTATAAAACATTTATCAAATATAGCAACTA
AAGCACATAATCGTTTTGATCCAGTTTTTGGTGTTACAATAGGAGCAAAAGTATCAGGTGTTCACTGGTTAATAAACAGT
CCCAATATGCCGCATGCTGCAGAGTATTGTACAGGCTATTATAATTATAGTACTTTGCTTGATCAGTTTAAGAAATCAAA
TTTAGATTTAACATTTACATGTCTTGAAAAGGATGATTCAAATCCATATAATTATCCTTATTCAGCACCAAAAAGTCTTG
TTATAAACATTGCAAACTTGGCTAGAGAAAAAGGTATAAAATATTTTGGAGAGAACGCATCAGATATTTATAATAATAAA
AAAGCATATGAAAATTGTGCTGAAATGTTATTTAATTATAATTTTTCAGGGTTTACACTTTTAAGACTTAAAAATATAGT
TAATTATGATGGAACACCTACCGCTGAAATGGCTCCTTTTGCGGATATTTTAGCCATTAAGCCAGTTCCAGTAACATTTA
CAGTAAATAATGTTAATTTAGAAAGCGATGAGAATTTATATTTAACTGGAAGTAGATGGGAGATGGCTAATTGGAGTACG
GAATTTTATCCGTTACAATTTAAAAATAATAATGGAAGTTATACAATTACCACACATCTCGCTGAAGGTCATAATTACGA
ATTTAAAGCGATAAAGAAGAATAATAATGGAAATGTAATATGGCAAGGTGGTTACAATCAGTTTTATAATGTTCCAAAAG
ATGGAGATTCCTATACTTGGAGTTGGTAA

Upstream 100 bases:

>100_bases
AAAATATAATTATATAATTTTAAGCTCTTAAAATATAATGAACTTTCTTCTAACAAATAATGCTTAAACCATTTATATAA
AAATTAAAGGGGGAATTTTC

Downstream 100 bases:

>100_bases
AATATAAATGTATTATTTATTAAAAATTTGTACAAAATAGATAAAACAATTTAATTTTTGTAAAATAATTTCAATTCTAG
TGTTGACAGTAAATTTAAAT

Product: beta-amylase

Products: NA

Alternate protein names: 1,4-alpha-D-glucan maltohydrolase [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MYYGNKILKKYGNFILSLVLAFALSLCFTFKAFAANMSPDYKCCVMGPLEKVDNWSDFKKQLITLKNNGVYAITTDVWWG
YVESEGDNKFDWSYYKTYGDTVRAAGLKWIPIISTHECGSNVGDSVNIPLPSWLWEKDTADNMKFKDENGVYNKETLSPW
WSDTIKQYDELYESFASNFSSYKDIIAKIYLSSGPAGELRFPSYNPSTGWSRGFLQCYTKAAKLDFQNAMKNKYDTISRL
NSEWGTSLKSFEQVSPPTDGDNFFVNGYKTNYGNDFLTWYQGVLIKHLSNIATKAHNRFDPVFGVTIGAKVSGVHWLINS
PNMPHAAEYCTGYYNYSTLLDQFKKSNLDLTFTCLEKDDSNPYNYPYSAPKSLVINIANLAREKGIKYFGENASDIYNNK
KAYENCAEMLFNYNFSGFTLLRLKNIVNYDGTPTAEMAPFADILAIKPVPVTFTVNNVNLESDENLYLTGSRWEMANWST
EFYPLQFKNNNGSYTITTHLAEGHNYEFKAIKKNNNGNVIWQGGYNQFYNVPKDGDSYTWSW

Sequences:

>Translated_542_residues
MYYGNKILKKYGNFILSLVLAFALSLCFTFKAFAANMSPDYKCCVMGPLEKVDNWSDFKKQLITLKNNGVYAITTDVWWG
YVESEGDNKFDWSYYKTYGDTVRAAGLKWIPIISTHECGSNVGDSVNIPLPSWLWEKDTADNMKFKDENGVYNKETLSPW
WSDTIKQYDELYESFASNFSSYKDIIAKIYLSSGPAGELRFPSYNPSTGWSRGFLQCYTKAAKLDFQNAMKNKYDTISRL
NSEWGTSLKSFEQVSPPTDGDNFFVNGYKTNYGNDFLTWYQGVLIKHLSNIATKAHNRFDPVFGVTIGAKVSGVHWLINS
PNMPHAAEYCTGYYNYSTLLDQFKKSNLDLTFTCLEKDDSNPYNYPYSAPKSLVINIANLAREKGIKYFGENASDIYNNK
KAYENCAEMLFNYNFSGFTLLRLKNIVNYDGTPTAEMAPFADILAIKPVPVTFTVNNVNLESDENLYLTGSRWEMANWST
EFYPLQFKNNNGSYTITTHLAEGHNYEFKAIKKNNNGNVIWQGGYNQFYNVPKDGDSYTWSW
>Mature_542_residues
MYYGNKILKKYGNFILSLVLAFALSLCFTFKAFAANMSPDYKCCVMGPLEKVDNWSDFKKQLITLKNNGVYAITTDVWWG
YVESEGDNKFDWSYYKTYGDTVRAAGLKWIPIISTHECGSNVGDSVNIPLPSWLWEKDTADNMKFKDENGVYNKETLSPW
WSDTIKQYDELYESFASNFSSYKDIIAKIYLSSGPAGELRFPSYNPSTGWSRGFLQCYTKAAKLDFQNAMKNKYDTISRL
NSEWGTSLKSFEQVSPPTDGDNFFVNGYKTNYGNDFLTWYQGVLIKHLSNIATKAHNRFDPVFGVTIGAKVSGVHWLINS
PNMPHAAEYCTGYYNYSTLLDQFKKSNLDLTFTCLEKDDSNPYNYPYSAPKSLVINIANLAREKGIKYFGENASDIYNNK
KAYENCAEMLFNYNFSGFTLLRLKNIVNYDGTPTAEMAPFADILAIKPVPVTFTVNNVNLESDENLYLTGSRWEMANWST
EFYPLQFKNNNGSYTITTHLAEGHNYEFKAIKKNNNGNVIWQGGYNQFYNVPKDGDSYTWSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM20 (carbohydrate binding type-20) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001554
- InterPro:   IPR018238
- InterPro:   IPR000125
- InterPro:   IPR002044
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00686 CBM_20; PF01373 Glyco_hydro_14 [H]

EC number: =3.2.1.2 [H]

Molecular weight: Translated: 61991; Mature: 61991

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS51166 CBM20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYGNKILKKYGNFILSLVLAFALSLCFTFKAFAANMSPDYKCCVMGPLEKVDNWSDFKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCHHHHHH
QLITLKNNGVYAITTDVWWGYVESEGDNKFDWSYYKTYGDTVRAAGLKWIPIISTHECGS
HEEEEECCCEEEEEECCEEEEEECCCCCCCCCHHHHHHCCHHHHCCEEEEEEEECCCCCC
NVGDSVNIPLPSWLWEKDTADNMKFKDENGVYNKETLSPWWSDTIKQYDELYESFASNFS
CCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SYKDIIAKIYLSSGPAGELRFPSYNPSTGWSRGFLQCYTKAAKLDFQNAMKNKYDTISRL
HHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSEWGTSLKSFEQVSPPTDGDNFFVNGYKTNYGNDFLTWYQGVLIKHLSNIATKAHNRFD
HHHHCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PVFGVTIGAKVSGVHWLINSPNMPHAAEYCTGYYNYSTLLDQFKKSNLDLTFTCLEKDDS
CEEEEEECCEECCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCC
NPYNYPYSAPKSLVINIANLAREKGIKYFGENASDIYNNKKAYENCAEMLFNYNFSGFTL
CCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEE
LRLKNIVNYDGTPTAEMAPFADILAIKPVPVTFTVNNVNLESDENLYLTGSRWEMANWST
EEEHHHHCCCCCCCCCCCCCHHHEEECCCEEEEEEECEEECCCCCEEEECCCEEECCCCC
EFYPLQFKNNNGSYTITTHLAEGHNYEFKAIKKNNNGNVIWQGGYNQFYNVPKDGDSYTW
EEEEEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEECCCHHHCCCCCCCCCCCC
SW
CC
>Mature Secondary Structure
MYYGNKILKKYGNFILSLVLAFALSLCFTFKAFAANMSPDYKCCVMGPLEKVDNWSDFKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCHHHHHH
QLITLKNNGVYAITTDVWWGYVESEGDNKFDWSYYKTYGDTVRAAGLKWIPIISTHECGS
HEEEEECCCEEEEEECCEEEEEECCCCCCCCCHHHHHHCCHHHHCCEEEEEEEECCCCCC
NVGDSVNIPLPSWLWEKDTADNMKFKDENGVYNKETLSPWWSDTIKQYDELYESFASNFS
CCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SYKDIIAKIYLSSGPAGELRFPSYNPSTGWSRGFLQCYTKAAKLDFQNAMKNKYDTISRL
HHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSEWGTSLKSFEQVSPPTDGDNFFVNGYKTNYGNDFLTWYQGVLIKHLSNIATKAHNRFD
HHHHCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PVFGVTIGAKVSGVHWLINSPNMPHAAEYCTGYYNYSTLLDQFKKSNLDLTFTCLEKDDS
CEEEEEECCEECCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCC
NPYNYPYSAPKSLVINIANLAREKGIKYFGENASDIYNNKKAYENCAEMLFNYNFSGFTL
CCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEE
LRLKNIVNYDGTPTAEMAPFADILAIKPVPVTFTVNNVNLESDENLYLTGSRWEMANWST
EEEHHHHCCCCCCCCCCCCCHHHEEECCCEEEEEEECEEECCCCCEEEECCCEEECCCCC
EFYPLQFKNNNGSYTITTHLAEGHNYEFKAIKKNNNGNVIWQGGYNQFYNVPKDGDSYTW
EEEEEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEECCCHHHCCCCCCCCCCCC
SW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2461360 [H]