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The map label for this gene is abgA [H]

Identifier: 226948469

GI number: 226948469

Start: 1417885

End: 1419330

Strand: Direct

Name: abgA [H]

Synonym: CLM_1355

Alternate gene names: 226948469

Gene position: 1417885-1419330 (Clockwise)

Preceding gene: 226948468

Following gene: 226948470

Centisome position: 34.12

GC content: 30.77

Gene sequence:

>1446_bases
ATGAAAACGAATTTTCCAGAAAATTTTTTGTGGGGTGGTGCAGTTGCAGCTAACCAATGTGAAGGAGCTTATAATATTGA
TGGTAAAGGATTAAGCGTGCAAGATGTAGCGCCAAAGGGAATAAAAGCTGGTCCTACATTAGAGCCTACACAAGATAATA
TGAAACTTATAGGTATAGATTTTTATCATAGATATAAAGAAGATATTAAGCTTTTTGCAGAAATGGGGTTTAAGGTTTTT
AGGTTATCAATTGCGTGGTCAAGAATATTCCCAATGGGGGATGAAAAAGAAGCAAACGAGAAGGGACTACAATTTTATGA
TGATGTTTTTGATGAGTGCTTAAAGTATGGCATACAGCCAATAGTAACATTGTCCCATTATGAAACACCATTGCATTTAT
CTAAAGCGTATGATGGATGGAAATGTCGTGAGATGATTGGATTTTTTAATAAGTATGTTTGTACAGTTTTTAATCGATAT
AAAAATAAAGTAAAATATTGGTTAACTTTTAATGAAATTAATTCAATTACTCATGCGCCATTTTTAAGTGGCGGAATTTA
TACACCAATAGAAAAATTAAGTAAGCAAGAAATTCATCGAGCTATTCATCATGAATTAGTAGCAAGTGCAATGGCAGTAA
AAGCGTGTCATGAAATTATTCCTGATGCTAAAATAGGATGTATGATTTTGGGGATGCCTGTATATCCATTGAAACCATCA
CCAGAAGATATGTGGGAGACTCTTAATAAAGAAAGAGAGAATTTTTTCTTTTCAGATATTCAAGTTCGCGGTTATTATCC
CTCATATTCAAAAAGATTCTTTAAAGAAAATAATATTAAATTAGATATTACAAATAAAGATATAGAAATATTAAAAAATA
CTGTAGATTTTATTTCATTTAGCTATTATATGAGTATTTGTGAATCTAGTGATAAATCTATTAGGGCAGGTGAAGGAAAT
ATTATTGGAGGGATACCTAATCCTTATTTAAAAGCAAGTGAATGGGGATGGCAAATTGATCCTAAAGGACTAAGGTATTA
TCTTAATATATTATATGATCGTTATCAAAAGCCATTATTTATAGTTGAAAATGGATTAGGAGCTGTAGATGAATTAGTTG
AGTTAGGAGATGGAACAAAAACAGTATTAGATGATTATAGAATTTCATATTTAAGAGATCATTTAATTCAAGTATCAGAA
GCAATCGAGGATGGAGTGGACTTAATGGGATATACTTCTTGGGGGTGCATTGATCTGGTTAGTTTTACCACTTCTGAATT
AAAAAAACGTTATGGATTTATTTATGTAGATCGTAATGATGATGGGACAGGGACATTAGAACGTTATAAGAAAAAAAGCT
TTTACTGGTATAAAGAAGTAATTTCAAGTAATGGAGATATTGAAGCACTATGCTCAAATATTAGTATTGAAAAAGATAAA
ATATAA

Upstream 100 bases:

>100_bases
TTAATAATGATGCTAATCTTTATGGAGCTTTGTATAATCTATTATTAGATGAAGAAACTATTGATATAATAAAAAATAAT
GAAAATATGGGAGATTAATT

Downstream 100 bases:

>100_bases
ATAGGTTAAATATATAGCAACTTTAATAGGAATTTGATGAAATAAATGTGTAATTATTGCAAATAGTTTTATAAACTATT
ACACTATTTATTTTATAGAA

Product: putative beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVF
RLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYGIQPIVTLSHYETPLHLSKAYDGWKCREMIGFFNKYVCTVFNRY
KNKVKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIHRAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
PEDMWETLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILKNTVDFISFSYYMSICESSDKSIRAGEGN
IIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELGDGTKTVLDDYRISYLRDHLIQVSE
AIEDGVDLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNISIEKDK
I

Sequences:

>Translated_481_residues
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVF
RLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYGIQPIVTLSHYETPLHLSKAYDGWKCREMIGFFNKYVCTVFNRY
KNKVKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIHRAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
PEDMWETLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILKNTVDFISFSYYMSICESSDKSIRAGEGN
IIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELGDGTKTVLDDYRISYLRDHLIQVSE
AIEDGVDLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNISIEKDK
I
>Mature_481_residues
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVF
RLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYGIQPIVTLSHYETPLHLSKAYDGWKCREMIGFFNKYVCTVFNRY
KNKVKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIHRAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
PEDMWETLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILKNTVDFISFSYYMSICESSDKSIRAGEGN
IIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELGDGTKTVLDDYRISYLRDHLIQVSE
AIEDGVDLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNISIEKDK
I

Specific function: Can Hydrolyze Salicin And Arbutin. [C]

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI110681710, Length=485, Percent_Identity=28.8659793814433, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI32481206, Length=483, Percent_Identity=27.7432712215321, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI13273313, Length=483, Percent_Identity=26.7080745341615, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI28376633, Length=478, Percent_Identity=26.9874476987448, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI24497614, Length=485, Percent_Identity=25.979381443299, Blast_Score=137, Evalue=3e-32,
Organism=Escherichia coli, GI2367270, Length=465, Percent_Identity=58.9247311827957, Blast_Score=566, Evalue=1e-162,
Organism=Escherichia coli, GI1789070, Length=481, Percent_Identity=52.3908523908524, Blast_Score=525, Evalue=1e-150,
Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=50.836820083682, Blast_Score=486, Evalue=1e-138,
Organism=Caenorhabditis elegans, GI17552856, Length=491, Percent_Identity=28.1059063136456, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17539390, Length=442, Percent_Identity=28.2805429864253, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI21356577, Length=470, Percent_Identity=25.531914893617, Blast_Score=136, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 55336; Mature: 55336

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGID
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEH
FYHRYKEDIKLFAEMGFKVFRLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYGIQP
HHHHHHHHHHHHHHCCHHEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE
IVTLSHYETPLHLSKAYDGWKCREMIGFFNKYVCTVFNRYKNKVKYWLTFNEINSITHAP
EEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCHHCCC
FLSGGIYTPIEKLSKQEIHRAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
PEDMWETLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILKNTVDFISF
HHHHHHHHHHHHHCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
SYYMSICESSDKSIRAGEGNIIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLF
HHHHHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEE
IVENGLGAVDELVELGDGTKTVLDDYRISYLRDHLIQVSEAIEDGVDLMGYTSWGCIDLV
EEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
SFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNISIEKDK
HHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
I
C
>Mature Secondary Structure
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGID
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEH
FYHRYKEDIKLFAEMGFKVFRLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYGIQP
HHHHHHHHHHHHHHCCHHEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE
IVTLSHYETPLHLSKAYDGWKCREMIGFFNKYVCTVFNRYKNKVKYWLTFNEINSITHAP
EEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCHHCCC
FLSGGIYTPIEKLSKQEIHRAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
PEDMWETLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILKNTVDFISF
HHHHHHHHHHHHHCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
SYYMSICESSDKSIRAGEGNIIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLF
HHHHHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEE
IVENGLGAVDELVELGDGTKTVLDDYRISYLRDHLIQVSEAIEDGVDLMGYTSWGCIDLV
EEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
SFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNISIEKDK
HHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA