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The map label for this gene is oxaA1 [H]

Identifier: 226225403

GI number: 226225403

Start: 2910378

End: 2911241

Strand: Reverse

Name: oxaA1 [H]

Synonym: Lm4b_02826

Alternate gene names: 226225403

Gene position: 2911241-2910378 (Counterclockwise)

Preceding gene: 226225404

Following gene: 226225402

Centisome position: 99.95

GC content: 36.23

Gene sequence:

>864_bases
TTGAAGAAGAAAAAGCGATTCAAACAGAAGTTGCTCATCGCAAGTCTTGTAATCGGATTAATGGCTGTACTTTCGGGTTG
TGGCTATTCAACTGATCCAATTACATCAGAATCAACTGGATTTTGGAGTCACTATATTGTATTTCCATTGTCCTGGACTA
TTACTTGGTTTTCCGATTTATTCGGGGGAAGTTACGCAGTCGGAATTATTGTTGTTACCATTTTAATCCGTCTACTTATC
ATGCCTTTAATGATCAAACAGCTGAAAAGCCAAAAGGCCATGACCAATTTACAACCGAAAATCAAAGAACTACAAGAGAA
ATACTCGTCTAAAGATAATGAAACAAAACAAAAACTACAACAAGAAACAATGCGTCTATATCAAGAAAATAGCGTAAATC
CAATGATGGGTTGTTTACCATTATTAATCCAAATGCCTATTCTACTAGGATTTTACCAAGCGATTAGTAGAACAGCAGAA
ATCAAAACAGATTCATTCTTATGGATGCAACTGGGAAATCCAGATCCATATTACATCTTACCGGTTGTTGCGGCATTAAC
AACATTCTTGTCATCAAAAATTTCTATGATGGGGCAAACACAGCAAAATAAATCAATGGCAATGATTGTTTATATCATGC
CTGTAATGATTCTATTTATGGGTATTACACTACCGTCTGCCCTTGCTCTATACTGGATTATCGGTAACATTTTCACCGTA
TTCCAAACACTTTTAATTAATAATCCTTTTAAAAACAAACGCGAACAGGAGGCGCTTGCTGCTGCTCAAGTTGCGGAAGA
TCGTTTGAAGAAAAAAGCAGCTAACATGAAGGCTTCCAAAAAAGGAGGTAAGAAAAGAAAGTGA

Upstream 100 bases:

>100_bases
TTGATTCATGTTTTAAAAGTGGGGCGTGTTTTAAAGCAAAAACCAAACAATTCAAAGTGAGTGGAAATTTTAAAAAGGCG
AAATTGGAGGTTACATCAAT

Downstream 100 bases:

>100_bases
GAGATATAACTGCGCAAGGCTCAAACGTTGAAGAAGCTATCCAAAATGCATTAGCCACTTTAGAAACAACACGCGACAAG
GTCGAAGTAGAAGTTCTAGA

Product: SpoIIIJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLI
MPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE
IKTDSFLWMQLGNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTV
FQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANMKASKKGGKKRK

Sequences:

>Translated_287_residues
MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLI
MPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE
IKTDSFLWMQLGNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTV
FQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANMKASKKGGKKRK
>Mature_287_residues
MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLI
MPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE
IKTDSFLWMQLGNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTV
FQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANMKASKKGGKKRK

Specific function: Required for the insertion of integral membrane proteins into the membrane. May also be involved in protein secretion processes [H]

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=207, Percent_Identity=36.7149758454106, Blast_Score=126, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6321002, Length=208, Percent_Identity=27.8846153846154, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24662345, Length=212, Percent_Identity=25, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356443, Length=212, Percent_Identity=25, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708
- InterPro:   IPR023060 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 32500; Mature: 32500

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
QETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTDSFLWMQLGNPDPYYIL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
PVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANMKASKKGGKKRK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSHYIVFPLSWTITWFSDL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSKDNETKQKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
QETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTDSFLWMQLGNPDPYYIL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
PVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANMKASKKGGKKRK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]