| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225401
Identifier: 226225401
GI number: 226225401
Start: 2909245
End: 2909706
Strand: Reverse
Name: 226225401
Synonym: Lm4b_02824
Alternate gene names: NA
Gene position: 2909706-2909245 (Counterclockwise)
Preceding gene: 226225402
Following gene: 226225399
Centisome position: 99.9
GC content: 40.26
Gene sequence:
>462_bases ATGGCGATTTATAAGGATTCAGTGCATGAAATGTGGGAGAAATACCGGACAGAATACCCGATGATTTCAAGTAAGTTTGA GGCATGGGCATTTGGTAACTCTAATCAGATGGCGAATGAGCTTGGTGGGCTTGTTATGGATGGGATAAAAACCGGCACGA GCAGCTTGTTTTATTGGTATGATCAAGGCGGAGAAACGATGCCGTCTGTTGGTTCTCATGTAGTGCTTTTAGATGGTAAT GAAGAAGCAATGGGGATTATCAAGTTAACAGGTGTAACTATTATGCCTTTTAATGAAGTACCTGAAACGTTTGCTTATTT GGAAGGAGAAGGTGACAGAACGCTAGAATATTGGCGAGAAGTACATACATCCTTTTTCAGTAATGAATGTGTGGAACTCG GTATTCCATTTGAAGAAGATGCTCTAGTGGTTTGTGAAGAGTTTGAGGTTGTTTATAAATAG
Upstream 100 bases:
>100_bases ACGCGATCCTTACCGTTATATTGTGATTAAGCCAGTTCGCAAATAAATTCTTAGACTGAGGTTTTAACGAACCTCAGTCT TTTTTTAGGAGGATACTTAA
Downstream 100 bases:
>100_bases AATGTTTCACGTGAAACAATAGAAGAGTACTGCGATTAATGCAGTACTCTTATTTTTTATTTCTTACTTCATTGGGTAAG AGATTGAATGTTTTTTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGLVMDGIKTGTSSLFYWYDQGGETMPSVGSHVVLLDGN EEAMGIIKLTGVTIMPFNEVPETFAYLEGEGDRTLEYWREVHTSFFSNECVELGIPFEEDALVVCEEFEVVYK
Sequences:
>Translated_153_residues MAIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGLVMDGIKTGTSSLFYWYDQGGETMPSVGSHVVLLDGN EEAMGIIKLTGVTIMPFNEVPETFAYLEGEGDRTLEYWREVHTSFFSNECVELGIPFEEDALVVCEEFEVVYK >Mature_152_residues AIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGLVMDGIKTGTSSLFYWYDQGGETMPSVGSHVVLLDGNE EAMGIIKLTGVTIMPFNEVPETFAYLEGEGDRTLEYWREVHTSFFSNECVELGIPFEEDALVVCEEFEVVYK
Specific function: Unknown
COG id: COG4405
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17416; Mature: 17285
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGLVMDGIKTGTSSLFYWY CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHCCCEECCCCCCCCEEEEEE DQGGETMPSVGSHVVLLDGNEEAMGIIKLTGVTIMPFNEVPETFAYLEGEGDRTLEYWRE CCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCHHHEEEECCCCHHHHHHHH VHTSFFSNECVELGIPFEEDALVVCEEFEVVYK HHHHHHCCCCEEECCCCCCCCEEEEEEEEEECC >Mature Secondary Structure AIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGLVMDGIKTGTSSLFYWY CCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHCCCEECCCCCCCCEEEEEE DQGGETMPSVGSHVVLLDGNEEAMGIIKLTGVTIMPFNEVPETFAYLEGEGDRTLEYWRE CCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCHHHEEEECCCCHHHHHHHH VHTSFFSNECVELGIPFEEDALVVCEEFEVVYK HHHHHHCCCCEEECCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA