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The map label for this gene is 226225062

Identifier: 226225062

GI number: 226225062

Start: 2565707

End: 2566558

Strand: Reverse

Name: 226225062

Synonym: Lm4b_02483

Alternate gene names: NA

Gene position: 2566558-2565707 (Counterclockwise)

Preceding gene: 226225063

Following gene: 226225061

Centisome position: 88.12

GC content: 38.85

Gene sequence:

>852_bases
ATGAACGAAAAAATAGCAGTGGTTACTGACAGCACAACTTATTTGCCAAATGAAGTGAAAGAGCAGCTACGAATTAATGT
CGTGCCACTTTCTGTAATAATTGACGGAAAATCTTATCGTGAAGGTGAGGAGTTATCTGCGGCTGATTTTTACAGAAAAG
TAAAAGAAGCTGAGAATTTCCCAACTTCCTCTCAACCTGCCCCAGGAGATTTCATTCACTTGTTCGAACAGCTGAAAGAA
CAAGGTTTTGATACTGTAATTAGTATTCATCTATCAAGCGGTATTAGTGGAACGTTTCAGAATGCGGCTTCAGCAGGAGA
GTTAATTGAGGGGCTAAATGTCGTCGCTTATGATTCTGAGCTTTCTTGCATGGCGCAAGGAATGTTTGTAGTTAAAGCAG
CTGAAATGGCTTTGGCAAATGAGCCGCTGGACCAGATTATCCAAAAACTAGATAAAATAAAACAGGCACAAGATGCTTAT
TTTATGGTAGATGATTTAAATAATTTACAGCGTGGCGGCCGTTTGAATGGAGCACAAGCCCTTGTTGGTAGCTTGCTTCA
AATTAAACCGATTCTTCATTTTAATGATAAACAAATTGTCCTCTTTGAAAAGGTTAGAACGCAAAAAAAGGCATTGAAAC
GAATTGAAGATATTCTTCAAAAAGCCGTTCAAAACAAAACGGCAGAAAAAGCTTATGTCATTCATGGCAATGATCTAGCG
AAGGGTGAAGCATGGCTTGCACAACTAGAAGCGAAATTCCCAGAAGTAACATTTGAATTAAGTTATTTTGGTCCAGTCAT
TGGAACTCACTTGGGTGAAGGTGCGCTTGGCTTAACTTGGTCAATAAAATAA

Upstream 100 bases:

>100_bases
TTTTACAAAAAATGAAAGTGAATGATAGGACTCAAGCGGTGGTAACGGCAATCAAGCACGGCTGGGTATATATTCGCTAA
AGAAATATCAGGGGGACTAT

Downstream 100 bases:

>100_bases
AAAATCTCCAGCTAAAAGCTGGAGATTTTTTTCATGGAGACTAAATTTGTTTTTTCAGTAGTTTTGGATGGCAAAAATAC
TCGTTTTCGTCTAAAAGAAA

Product: YviA (DegV) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEELSAADFYRKVKEAENFPTSSQPAPGDFIHLFEQLKE
QGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSELSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAY
FMVDDLNNLQRGGRLNGAQALVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGNDLA
KGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGALGLTWSIK

Sequences:

>Translated_283_residues
MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEELSAADFYRKVKEAENFPTSSQPAPGDFIHLFEQLKE
QGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSELSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAY
FMVDDLNNLQRGGRLNGAQALVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGNDLA
KGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGALGLTWSIK
>Mature_283_residues
MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEELSAADFYRKVKEAENFPTSSQPAPGDFIHLFEQLKE
QGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSELSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAY
FMVDDLNNLQRGGRLNGAQALVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGNDLA
KGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGALGLTWSIK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31255; Mature: 31255

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEELSAADFYRKVKEAENF
CCCEEEEEECCCCCCCHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
PTSSQPAPGDFIHLFEQLKEQGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSE
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCH
LSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAYFMVDDLNNLQRGGRLNGAQA
HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCHHHH
LVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGNDLA
HHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
KGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGALGLTWSIK
CHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEELSAADFYRKVKEAENF
CCCEEEEEECCCCCCCHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
PTSSQPAPGDFIHLFEQLKEQGFDTVISIHLSSGISGTFQNAASAGELIEGLNVVAYDSE
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCH
LSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAYFMVDDLNNLQRGGRLNGAQA
HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCHHHH
LVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDILQKAVQNKTAEKAYVIHGNDLA
HHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
KGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGALGLTWSIK
CHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]