Click here to switch to the map view.

The map label for this gene is yvlD [H]

Identifier: 226225032

GI number: 226225032

Start: 2531992

End: 2532345

Strand: Reverse

Name: yvlD [H]

Synonym: Lm4b_02453

Alternate gene names: 226225032

Gene position: 2532345-2531992 (Counterclockwise)

Preceding gene: 226225033

Following gene: 226225031

Centisome position: 86.94

GC content: 33.05

Gene sequence:

>354_bases
ATGCGTTGGATTATAGGCGTAATTATTAACTCGGTGCTTTTCGTAGCTTTATCAGGATTCTTTACAAGTTTTCATGTAGA
TGGATTCACGACAGCGCTACTAGCGAGTTTTATATTAGCAATTCTAAATATGCTAATTAGACCTATTTTACTCCTTTTAA
CATTACCAATTAATATTTTCACACTTGGACTTTTCACCTTTGTTGTGAATGCAATTATGCTTGAAATGACTACCTTCTTT
ATTGGAGATTCTTTCCAAATTGATGGTTTTGGAACAGCGTTAATTCTCGCAGCAATTATGGCATTCGCAAACATGATTAT
TAATTCCGTTTTATGGGGTAACAAAGAAAAATAA

Upstream 100 bases:

>100_bases
GAGCAGTTCTATTCTTTGGTACTGGGATTTTACTGTATATTCTAGCTGCGATTATTATGCCAACAGCAACACCTGAATCA
GAATGGGAGTGAACTAAAAC

Downstream 100 bases:

>100_bases
ACATTCCAGCTACATTTTGAGGCTAAAAATAGTCTTTTAAATGTAGCTGGTTTTGCTATGTAGAGCCATTTGAGTAGAAA
GAGGTAGCTTGATTCCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNMLIRPILLLLTLPINIFTLGLFTFVVNAIMLEMTTFF
IGDSFQIDGFGTALILAAIMAFANMIINSVLWGNKEK

Sequences:

>Translated_117_residues
MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNMLIRPILLLLTLPINIFTLGLFTFVVNAIMLEMTTFF
IGDSFQIDGFGTALILAAIMAFANMIINSVLWGNKEK
>Mature_117_residues
MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNMLIRPILLLLTLPINIFTLGLFTFVVNAIMLEMTTFF
IGDSFQIDGFGTALILAAIMAFANMIINSVLWGNKEK

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 12923; Mature: 12923

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNMLIRPILLLLTLPINIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGLFTFVVNAIMLEMTTFFIGDSFQIDGFGTALILAAIMAFANMIINSVLWGNKEK
HHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNMLIRPILLLLTLPINIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGLFTFVVNAIMLEMTTFFIGDSFQIDGFGTALILAAIMAFANMIINSVLWGNKEK
HHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]