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The map label for this gene is pspC [C]

Identifier: 226225033

GI number: 226225033

Start: 2532354

End: 2532554

Strand: Reverse

Name: pspC [C]

Synonym: Lm4b_02454

Alternate gene names: 226225033

Gene position: 2532554-2532354 (Counterclockwise)

Preceding gene: 226225034

Following gene: 226225032

Centisome position: 86.95

GC content: 37.81

Gene sequence:

>201_bases
ATGAAAAAGTTATATAAATCTTCTTCACAAAAAATGATTGCTGGTGTCTGTGGTGGACTTGCAGAATACTTTGGCATTGA
AGTAACCATCATTCGTTTACTTTGGGCTGGAGCAGTTCTATTCTTTGGTACTGGGATTTTACTGTATATTCTAGCTGCGA
TTATTATGCCAACAGCAACACCTGAATCAGAATGGGAGTGA

Upstream 100 bases:

>100_bases
TAAGCATGGCGACACTTCAAGCAAAAGTAGGAAATGGAATTATTAAAGTTTCTGAACTGGAAACAAAGAACGTTTAATAA
AATGAAAGGAAGGGAAAACA

Downstream 100 bases:

>100_bases
ACTAAAACATGCGTTGGATTATAGGCGTAATTATTAACTCGGTGCTTTTCGTAGCTTTATCAGGATTCTTTACAAGTTTT
CATGTAGATGGATTCACGAC

Product: PspC domain-containing protein

Products: NA

Alternate protein names: Stress-Responsive Transcriptional Regulator PspC; PspC Domain Protein Truncated; Stress-Responsive Transcriptional Regulator; PspC Domain-Containing Protein

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGTGILLYILAAIIMPTATPESEWE

Sequences:

>Translated_66_residues
MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGTGILLYILAAIIMPTATPESEWE
>Mature_66_residues
MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGTGILLYILAAIIMPTATPESEWE

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspc Is Involved In Transcription Regulation. [C]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7213; Mature: 7213

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGTGILLYILAAIIMPTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PESEWE
CCCCCC
>Mature Secondary Structure
MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGTGILLYILAAIIMPTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PESEWE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA