| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yeiH [C]
Identifier: 226224754
GI number: 226224754
Start: 2233146
End: 2234153
Strand: Direct
Name: yeiH [C]
Synonym: Lm4b_02172
Alternate gene names: 226224754
Gene position: 2233146-2234153 (Clockwise)
Preceding gene: 226224750
Following gene: 226224755
Centisome position: 76.67
GC content: 38.69
Gene sequence:
>1008_bases ATGAGTCAAATTTTATTTAAAACGAAGACTTTTTGGTATGGTATTGCGCTTACTTTCTGTATTGCTACCTTATCTTATTT TTTAGCGAAGTTGCCTTTTTTAATGATTCTCGGACAACTTGTAACTGCTATTTTAATTGGTATTATCATTCGTGCACTTT TCCCAGTTCCTGAAAAATGGTTTACTGGTATTCAGTTTTCCAACAAGGTAATTCTTCGTGCTGGGATTATTTTACTTGGT TTTCGCTTGAACTTAGTTGATATTTATCATGCTGGCTGGCGAGTGTTTCTCATTGCTGCCTTATGCCTTAGCTTTGGTAT TACTATTGTTTATTTCTTAGCCAAACTTTTTGGAGTGGATAAAAAACTAGCTATTTTGGTCGCTTGTGGTACAGGGATTT GTGGTGCTGCTGCAGTAGTTGCAATTTCTCCACAAGTAAAAGCTGATAATAACCAAACGGCTGTGGCTGCTACAATTATT GCATTACTGGGAACTATTTTCACTGTTATCTATACGTTGATTTATCCAATTCTGCCACTTGGACCAGACGGTTATGGGAT TTTTGCAGGGGCTACACTTCATGAAATTGCCCACGTTATTGCAGCTGCAGATCCAGGCGGCTCATCAGCTGTTGATATGG CGGTTATTGTTAAATTAACACGTGTAGCCTTACTTGTTCCAGTCTGCTTTGTTGTTGCAAAAATGGTTAATGCTGGAACT AAAAACCGTTTTTCATGGGCTGAACTTCCTGTACCTTGGTTTATTTTCGGCTTTTTAGCAACTAGTGCAATTAACAGCTT TGGAATTATTCCAACATCTGTAACTGATTTTCTTGTCATCTGCGCATATTTCCTCATTGCTATGTCAATGGGCGGACTCG GTTTAAATGTCCACTTGCCATCGTTCGGAAAAATGGGTGGAAAACCTTTTGCTGCGGCGTTAATCGGTTCTGTTTTCCTT TCCGCATTTGGTCTAGCTTTAGTACTTTTGTTTCATTTAGCAGGTTAA
Upstream 100 bases:
>100_bases CACCTCCATAAAAATAACTTATCAATAATATAATTAATATAAATTTTACTAATAAAATCAAGAATGGTAAAGTAAAAGTA TAAAAGAAAGGGGGATGAAC
Downstream 100 bases:
>100_bases GATGTCCTCGTCACCTCGATTTGTGATACAATAGCAAACACGAGGTGACTATTTCATGACGAAAGCAATTTGGACTTGCC GAGCGTTCTTACTCGGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPEKWFTGIQFSNKVILRAGIILLG FRLNLVDIYHAGWRVFLIAALCLSFGITIVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATII ALLGTIFTVIYTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVKLTRVALLVPVCFVVAKMVNAGT KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFL SAFGLALVLLFHLAG
Sequences:
>Translated_335_residues MSQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPEKWFTGIQFSNKVILRAGIILLG FRLNLVDIYHAGWRVFLIAALCLSFGITIVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATII ALLGTIFTVIYTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVKLTRVALLVPVCFVVAKMVNAGT KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFL SAFGLALVLLFHLAG >Mature_334_residues SQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPEKWFTGIQFSNKVILRAGIILLGF RLNLVDIYHAGWRVFLIAALCLSFGITIVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATIIA LLGTIFTVIYTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVKLTRVALLVPVCFVVAKMVNAGTK NRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFLS AFGLALVLLFHLAG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=326, Percent_Identity=34.9693251533742, Blast_Score=168, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35642; Mature: 35511
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPEKW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALCLSFGITIVYFLAKLFGVD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATIIALLGTIFTVIYTLIYPILPL CHHEEEEEECCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVKLTRVALLVPVCFVVAKMVNAGT CCCCCCEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTDFLVICAYFLIAMSMGGLGLNVHLP CCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC SFGKMGGKPFAAALIGSVFLSAFGLALVLLFHLAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPEKW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALCLSFGITIVYFLAKLFGVD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATIIALLGTIFTVIYTLIYPILPL CHHEEEEEECCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVKLTRVALLVPVCFVVAKMVNAGT CCCCCCEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTDFLVICAYFLIAMSMGGLGLNVHLP CCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC SFGKMGGKPFAAALIGSVFLSAFGLALVLLFHLAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]