Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226224755

Identifier: 226224755

GI number: 226224755

Start: 2234209

End: 2234850

Strand: Direct

Name: 226224755

Synonym: Lm4b_02173

Alternate gene names: NA

Gene position: 2234209-2234850 (Clockwise)

Preceding gene: 226224754

Following gene: 226224757

Centisome position: 76.71

GC content: 34.89

Gene sequence:

>642_bases
ATGACGAAAGCAATTTGGACTTGCCGAGCGTTCTTACTCGGATACTTTCTTGTGCTGCATTTCACTGCAGATACTTACAC
TTTTCTAATTTTAAATGTCGGGCTTGCTTATATACCTTTCGAAATAGCAGTATTTCTCACAAAAAAACCTCGCGTCTGGT
GGATTTTTTGGCCACTAGGTATTGTTTGGCTAGTATTTTTCCCAAATGCACCGTATCTTTTAACTGATTTACTTCATTTA
CAACGTTTAGAAATATACGGGGCAGAAGGAATACTTTCAACAGCACCTTGGTTATGGCGACATTTCACTTATATTATCGT
CGGTGTGTTCTTTGGATTATTTATTGGATTCTGGTCTTTCGCAAAAATGCTTGCAGAAATAAGAAGACGATTTAATTGGA
CTAGTTTACTAAGTTATCAATTACTTTTGATAGGATTAATTTTGTTATCTAGTTATGCGATATACATTGGACGGTTCTCT
CGTTTACACTCCATCCATTTACTTACGCAGCCAATTGACTCATTGCAAATTATGTTTAGTGTTTTTCACTGGCCATTTTG
GAATTTTGTGTTTTACTTTTCGATTATCCAATATGTAATTTATACGCTATTTAGCAGGTTTTCTAGCTCACTAAAAAACT
AA

Upstream 100 bases:

>100_bases
GCATTTGGTCTAGCTTTAGTACTTTTGTTTCATTTAGCAGGTTAAGATGTCCTCGTCACCTCGATTTGTGATACAATAGC
AAACACGAGGTGACTATTTC

Downstream 100 bases:

>100_bases
AAACGTTTGTATTTTAGGAAAATTAATTTTCTTAAATACAAACGTTTTTTTAATCGATATGTAGCTTACTTCGCTCTGTT
GAAAAACCTTGAGGATAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAVFLTKKPRVWWIFWPLGIVWLVFFPNAPYLLTDLLHL
QRLEIYGAEGILSTAPWLWRHFTYIIVGVFFGLFIGFWSFAKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFS
RLHSIHLLTQPIDSLQIMFSVFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN

Sequences:

>Translated_213_residues
MTKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAVFLTKKPRVWWIFWPLGIVWLVFFPNAPYLLTDLLHL
QRLEIYGAEGILSTAPWLWRHFTYIIVGVFFGLFIGFWSFAKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFS
RLHSIHLLTQPIDSLQIMFSVFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN
>Mature_212_residues
TKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAVFLTKKPRVWWIFWPLGIVWLVFFPNAPYLLTDLLHLQ
RLEIYGAEGILSTAPWLWRHFTYIIVGVFFGLFIGFWSFAKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFSR
LHSIHLLTQPIDSLQIMFSVFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN

Specific function: Unknown

COG id: COG4330

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25376; Mature: 25244

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAVFLTKKPRVWWIFWPLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHH
IVWLVFFPNAPYLLTDLLHLQRLEIYGAEGILSTAPWLWRHFTYIIVGVFFGLFIGFWSF
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFSRLHSIHLLTQPIDSLQIMFS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAVFLTKKPRVWWIFWPLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHH
IVWLVFFPNAPYLLTDLLHLQRLEIYGAEGILSTAPWLWRHFTYIIVGVFFGLFIGFWSF
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFSRLHSIHLLTQPIDSLQIMFS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA