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The map label for this gene is ydaJ [H]

Identifier: 226224517

GI number: 226224517

Start: 1974208

End: 1975212

Strand: Direct

Name: ydaJ [H]

Synonym: Lm4b_01930

Alternate gene names: 226224517

Gene position: 1974208-1975212 (Clockwise)

Preceding gene: 226224516

Following gene: 226224518

Centisome position: 67.78

GC content: 33.53

Gene sequence:

>1005_bases
ATGAAACGATTCATCTTAATTTTCATTTTAATTATCCTTATTGGCGCCGGATTTTTCTTTTTCCTTCGTCCAGAACCTAA
AAAAACAGTGAGTGCACCAAAAGAAACCACACCCACTTCCACCTCTGTTCAAACGTATGTGAAAGAAAACTATACTGCAA
AAAACGGTTTAATTGTGGATTACAAAAATGCGCAAGAACCGCATTATTTAGCCGAAAGCATCGGACTTTATATGGAATAT
TTGGTCGAAGTGAATGATAGTAAAACTTTCCAAGAACAAGTAAGTCATTTAGAAAAGAATTTTATAACCGAAGATAACTT
TATTAAATGGGAAGCAACCGACGCAACAACGACTAATGCGATTGTAGATGATTTCCGTATTACAGAAGCACTTTATCAAG
CGAGCGAAAAATTTAGTTTCCCGTCCTACAAAAAAATGGCAGATAAAATCCTAGCCAACACCAAAAAATATAGCGCTGAA
CAAGGTGTTCCAGTAGACTTTTACGATTTTGTTCATAAGAAAAAAGCAGATACGCTCCATTTAAGCTATCTAAATATCCA
AGCGATGCAACAGATTAATTATCGAGATAAAGCCTATCTACCAATTCAAACTGTTAATGCTGACCCATTTTTTACAGAAG
TGTTTCAAAATGAACAGTTTCAATATGCTGACCCTAGTGAAGTTAATATGATTGATCAAATGCTCATTGCGATGGCTTAT
TTTGATGAAAATGGTGATGTAGAGCCAAATTTCGATAATTTTTTACAAACAGAATTAGCTTCTAAAGGAAAAGTTTATGC
ACGTTATCAAAGAGAAACAAAGAATCCAAGTTCAGAAAACGAATCTACCGCCGTTTATGCCTTTTTGACACAGTATTTTA
ACAAGACAAATCAAGCTAAAAATGGTAAAATCACCAAAGAGTTATTAGAGAAAATGGACACGTCAAATCCAGAAACAACC
CATTTTTTCGATTATATAAATAAAGAAATAACTCTTAAGAAATAA

Upstream 100 bases:

>100_bases
TTTCAACAACCGAATCACTTTTCGAAGCTGCTGACCAAGCGCTCTATCAAGCAAAACAAAACGGCCGCAATCAAATTGCT
GTTCATCAGGGGGAACTCGA

Downstream 100 bases:

>100_bases
CGGAAAGAAGTTGGACAAATGAAAAAGCCCACTGTACGTGAGATTATTGATCAAAATCACTTTGATACAATATATGAACC
GATTGTTGTTGTAGAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQTYVKENYTAKNGLIVDYKNAQEPHYLAESIGLYMEY
LVEVNDSKTFQEQVSHLEKNFITEDNFIKWEATDATTTNAIVDDFRITEALYQASEKFSFPSYKKMADKILANTKKYSAE
QGVPVDFYDFVHKKKADTLHLSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNEQFQYADPSEVNMIDQMLIAMAY
FDENGDVEPNFDNFLQTELASKGKVYARYQRETKNPSSENESTAVYAFLTQYFNKTNQAKNGKITKELLEKMDTSNPETT
HFFDYINKEITLKK

Sequences:

>Translated_334_residues
MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQTYVKENYTAKNGLIVDYKNAQEPHYLAESIGLYMEY
LVEVNDSKTFQEQVSHLEKNFITEDNFIKWEATDATTTNAIVDDFRITEALYQASEKFSFPSYKKMADKILANTKKYSAE
QGVPVDFYDFVHKKKADTLHLSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNEQFQYADPSEVNMIDQMLIAMAY
FDENGDVEPNFDNFLQTELASKGKVYARYQRETKNPSSENESTAVYAFLTQYFNKTNQAKNGKITKELLEKMDTSNPETT
HFFDYINKEITLKK
>Mature_334_residues
MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQTYVKENYTAKNGLIVDYKNAQEPHYLAESIGLYMEY
LVEVNDSKTFQEQVSHLEKNFITEDNFIKWEATDATTTNAIVDDFRITEALYQASEKFSFPSYKKMADKILANTKKYSAE
QGVPVDFYDFVHKKKADTLHLSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNEQFQYADPSEVNMIDQMLIAMAY
FDENGDVEPNFDNFLQTELASKGKVYARYQRETKNPSSENESTAVYAFLTQYFNKTNQAKNGKITKELLEKMDTSNPETT
HFFDYINKEITLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38755; Mature: 38755

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQTYVKENYTAKNGLIVD
CCHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE
YKNAQEPHYLAESIGLYMEYLVEVNDSKTFQEQVSHLEKNFITEDNFIKWEATDATTTNA
ECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH
IVDDFRITEALYQASEKFSFPSYKKMADKILANTKKYSAEQGVPVDFYDFVHKKKADTLH
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEE
LSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNEQFQYADPSEVNMIDQMLIAMAY
EEHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FDENGDVEPNFDNFLQTELASKGKVYARYQRETKNPSSENESTAVYAFLTQYFNKTNQAK
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
NGKITKELLEKMDTSNPETTHFFDYINKEITLKK
CCCHHHHHHHHHCCCCCCHHHHHHHHCCEEEECC
>Mature Secondary Structure
MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQTYVKENYTAKNGLIVD
CCHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE
YKNAQEPHYLAESIGLYMEYLVEVNDSKTFQEQVSHLEKNFITEDNFIKWEATDATTTNA
ECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH
IVDDFRITEALYQASEKFSFPSYKKMADKILANTKKYSAEQGVPVDFYDFVHKKKADTLH
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEE
LSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNEQFQYADPSEVNMIDQMLIAMAY
EEHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FDENGDVEPNFDNFLQTELASKGKVYARYQRETKNPSSENESTAVYAFLTQYFNKTNQAK
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
NGKITKELLEKMDTSNPETTHFFDYINKEITLKK
CCCHHHHHHHHHCCCCCCHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]