Click here to switch to the map view.

The map label for this gene is yloA [H]

Identifier: 226224432

GI number: 226224432

Start: 1890408

End: 1892120

Strand: Direct

Name: yloA [H]

Synonym: Lm4b_01845

Alternate gene names: 226224432

Gene position: 1890408-1892120 (Clockwise)

Preceding gene: 226224419

Following gene: 226224433

Centisome position: 64.9

GC content: 40.92

Gene sequence:

>1713_bases
ATGGCGTTTGATGCAATGTTTTTAAAAGCGATGACCGAAGAACTTGCCGAACACGGAGAAAGTGGACGTATTATGAAAAT
CCATCAACCGTTCTCGCATGAACTTGTTTTATATATTCGAAAAAACCGTGAAAATAAACGTTTACTGATCTCCTCGCATC
CAAGCTATGCGCGGATTCAGTGGACCGATGATATTCCCGAAAACCCAGCAACCCCACCGATGTTTTGTATGTTACTGAGA
AAATACTTAGAAGGCGCGATTATTGAATCGATTACGCAACTTCCTAATGAACGAATTTTACAATTTAGTATTCGCGGTAA
AGATGATATCGGTGAAAATCGTTTTTGTGATTTATTTGTAGAAATTATGGGACGGCATAGTAATATCACTCTTGTCGACC
GTGCGAAAAATGTGATTGTTGATTGTATTAAACACGTTTCCCCTGCACAAAATAGTTACCGAACACTGCTTCCGGGAGCG
ACTTATGTTTTACCTCCTGCAACGGATAAACTCCACCCATTTGAGGTTACTTCGGAGCAGATTCTGGATAGACTAGATTT
CTCAGCGGGTCGAATGGATAAGCAACTTGTACAAAATTTTGCAGGATTCAGCCCTTTGCTTGCTCGGGAAATAGTATTTC
GTGCTGGGAACTTAACGGCAGATTCGCTAGTTGCCGCCTTTTTCGAAGTAATTGGGCTAGTGAACGAGCATTTAGGCCAT
GCAGCCGTGCCAAACGAATGGCGCATCCAAAATAAAGAGGATTACTATTTTTTCCCGCTCCGCCATGTCGATGCAGAAAC
AACCGAATTCGCGAATTTAAGCACCCTATTAGACCATTTTTATATTGGTAAAGCGCGTCGTGATCGTGTCCATCAATTTG
CACATGATTTAGAAAAACTCTTATCCAACGAACTGGCTCGAAGCAGGCTGAAAATCGAAAAACTCGAAAACACTTTGCTC
GAAACAGAAAAAGCAGATGTTTATCGTATTCAAGGTGAACTTCTAACTGCCAATCTGCATTTAATGGAACGCGGGATGGA
AGAAATTACTGTAGAAAACTTTTACGATGATATGAAGAAAATGACGATTGCACTTGATACTAGAAAAACACCCTCCGCCA
ATGCGCAAAGCTACTTTAGCCGCTACCAAAAACTACGTAACGCGGTCGAAGTAGTGAAAGAGCAAATCGCGCTCACGAAA
GAAGAAATTACTTACTTAGAGTCCGTGGAATCACAACTTGAAACATCTGGCCCACAAGACGTGGAAGAAATCCGCCAAGA
ACTAGCTGAACAAGGCTATCTTCGCTACAAACAGAAAAAAGGCAGCCGAAAAAAAGCGACTTTACCTGCTCCAGAAAAAT
ATACTTCTTCGACCGGCTTAACGATTTTAGTCGGAAAAAATAATAAACAAAATGATTATTTAACGAATAAATTAGCTAGG
AATAATGAATACTGGTTCCATGTAAAAGATTTGCCTGGTTCGCATGTGGTCATTCAATCGAATGATCCAGATGAGACATC
GATTACAGAAGCCGCAATGATTGCAGCCTATTATTCGAAAGCGCGCCTTTCAGCAACCGTCCCCGTTGACGGCACGCTCG
TAAAACACGTGAAGAAACCAAATGGTGCCAAACCTGGTTATGTCATTTATGATAACCAAACGACTTATTTCGTTACACCT
GATGAAAAGCTTGTTTTAGAGTTAAAAAATTAA

Upstream 100 bases:

>100_bases
CTGACTTCTTATTATACCAAAGCTACTCCTTGCATACAATACATTTTCGGAATGTATGTTAAAATAGAAAGTAACTAACT
CACAAAGGAATGAATAACTA

Downstream 100 bases:

>100_bases
CGGTTCCTTCCTGGAGCCGTTTTTTCTTTCTAATTTTAGGGTAGATGTGTACTGACTTTACTTTTTTATTGGAAGGATGA
TAGAGGAATGAAAATTTTAT

Product: fibronectin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MAFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRENKRLLISSHPSYARIQWTDDIPENPATPPMFCMLLR
KYLEGAIIESITQLPNERILQFSIRGKDDIGENRFCDLFVEIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGA
TYVLPPATDKLHPFEVTSEQILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNLTADSLVAAFFEVIGLVNEHLGH
AAVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTLLDHFYIGKARRDRVHQFAHDLEKLLSNELARSRLKIEKLENTLL
ETEKADVYRIQGELLTANLHLMERGMEEITVENFYDDMKKMTIALDTRKTPSANAQSYFSRYQKLRNAVEVVKEQIALTK
EEITYLESVESQLETSGPQDVEEIRQELAEQGYLRYKQKKGSRKKATLPAPEKYTSSTGLTILVGKNNKQNDYLTNKLAR
NNEYWFHVKDLPGSHVVIQSNDPDETSITEAAMIAAYYSKARLSATVPVDGTLVKHVKKPNGAKPGYVIYDNQTTYFVTP
DEKLVLELKN

Sequences:

>Translated_570_residues
MAFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRENKRLLISSHPSYARIQWTDDIPENPATPPMFCMLLR
KYLEGAIIESITQLPNERILQFSIRGKDDIGENRFCDLFVEIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGA
TYVLPPATDKLHPFEVTSEQILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNLTADSLVAAFFEVIGLVNEHLGH
AAVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTLLDHFYIGKARRDRVHQFAHDLEKLLSNELARSRLKIEKLENTLL
ETEKADVYRIQGELLTANLHLMERGMEEITVENFYDDMKKMTIALDTRKTPSANAQSYFSRYQKLRNAVEVVKEQIALTK
EEITYLESVESQLETSGPQDVEEIRQELAEQGYLRYKQKKGSRKKATLPAPEKYTSSTGLTILVGKNNKQNDYLTNKLAR
NNEYWFHVKDLPGSHVVIQSNDPDETSITEAAMIAAYYSKARLSATVPVDGTLVKHVKKPNGAKPGYVIYDNQTTYFVTP
DEKLVLELKN
>Mature_569_residues
AFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRENKRLLISSHPSYARIQWTDDIPENPATPPMFCMLLRK
YLEGAIIESITQLPNERILQFSIRGKDDIGENRFCDLFVEIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGAT
YVLPPATDKLHPFEVTSEQILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNLTADSLVAAFFEVIGLVNEHLGHA
AVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTLLDHFYIGKARRDRVHQFAHDLEKLLSNELARSRLKIEKLENTLLE
TEKADVYRIQGELLTANLHLMERGMEEITVENFYDDMKKMTIALDTRKTPSANAQSYFSRYQKLRNAVEVVKEQIALTKE
EITYLESVESQLETSGPQDVEEIRQELAEQGYLRYKQKKGSRKKATLPAPEKYTSSTGLTILVGKNNKQNDYLTNKLARN
NEYWFHVKDLPGSHVVIQSNDPDETSITEAAMIAAYYSKARLSATVPVDGTLVKHVKKPNGAKPGYVIYDNQTTYFVTPD
EKLVLELKN

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 65222; Mature: 65091

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRENKRLLISSHPSYARIQ
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCEEEEECCCCEEEEE
WTDDIPENPATPPMFCMLLRKYLEGAIIESITQLPNERILQFSIRGKDDIGENRFCDLFV
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHH
EIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGATYVLPPATDKLHPFEVTSEQ
HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCHHH
ILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNLTADSLVAAFFEVIGLVNEHLGH
HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
AAVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTLLDHFYIGKARRDRVHQFAHDLEKL
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LSNELARSRLKIEKLENTLLETEKADVYRIQGELLTANLHLMERGMEEITVENFYDDMKK
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEHHHHHHCCHHHHHHHHHHHHHHH
MTIALDTRKTPSANAQSYFSRYQKLRNAVEVVKEQIALTKEEITYLESVESQLETSGPQD
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VEEIRQELAEQGYLRYKQKKGSRKKATLPAPEKYTSSTGLTILVGKNNKQNDYLTNKLAR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHC
NNEYWFHVKDLPGSHVVIQSNDPDETSITEAAMIAAYYSKARLSATVPVDGTLVKHVKKP
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCC
NGAKPGYVIYDNQTTYFVTPDEKLVLELKN
CCCCCCEEEECCCEEEEECCCCEEEEEECC
>Mature Secondary Structure 
AFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRENKRLLISSHPSYARIQ
CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCEEEEECCCCEEEEE
WTDDIPENPATPPMFCMLLRKYLEGAIIESITQLPNERILQFSIRGKDDIGENRFCDLFV
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHH
EIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGATYVLPPATDKLHPFEVTSEQ
HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCHHH
ILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNLTADSLVAAFFEVIGLVNEHLGH
HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
AAVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTLLDHFYIGKARRDRVHQFAHDLEKL
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LSNELARSRLKIEKLENTLLETEKADVYRIQGELLTANLHLMERGMEEITVENFYDDMKK
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEHHHHHHCCHHHHHHHHHHHHHHH
MTIALDTRKTPSANAQSYFSRYQKLRNAVEVVKEQIALTKEEITYLESVESQLETSGPQD
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VEEIRQELAEQGYLRYKQKKGSRKKATLPAPEKYTSSTGLTILVGKNNKQNDYLTNKLAR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHC
NNEYWFHVKDLPGSHVVIQSNDPDETSITEAAMIAAYYSKARLSATVPVDGTLVKHVKKP
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCC
NGAKPGYVIYDNQTTYFVTPDEKLVLELKN
CCCCCCEEEECCCEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]