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The map label for this gene is rpmB

Identifier: 226224419

GI number: 226224419

Start: 1877207

End: 1877395

Strand: Direct

Name: rpmB

Synonym: Lm4b_01832

Alternate gene names: 226224419

Gene position: 1877207-1877395 (Clockwise)

Preceding gene: 226224393

Following gene: 226224432

Centisome position: 64.45

GC content: 42.86

Gene sequence:

>189_bases
ATGGCTAAAGAATGTGTTATTACAGGCCGCAAATCACGTTCCGGTAACAAACGTTCCCACGCAATGAACTCCAGCAAACG
TACTTGGAAAGCTAACTTGCAAAAAGTACGGATTCTGGTTAACGGCAAACCTAAAAAAGTTTGGGTATCTGCTCGTGCGC
TTAAATCTGGTAAAGTGGAACGCGTTTAA

Upstream 100 bases:

>100_bases
AGTATACTTGTTTATGATAAATTATTCTAGTGTATGAAAAACAAATGGATAGGTTATTTTAAATAAATTATCCGAAGAGC
TCTGTAAGGAGGGGTAAACT

Downstream 100 bases:

>100_bases
TTGAAGGAGAAATCAAGTGCAGCGACAATTATGTCGGTGCATTTTTTCTTTGCCTTAAAATAAAAAAATACAGGCCGAGT
GCACCTGTATTTCTAGTTAA

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKPKKVWVSARALKSGKVERV

Sequences:

>Translated_62_residues
MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKPKKVWVSARALKSGKVERV
>Mature_61_residues
AKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKPKKVWVSARALKSGKVERV

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_LISIN (P66145)

Other databases:

- EMBL:   AL596170
- PIR:   AH1673
- RefSeq:   NP_471264.1
- ProteinModelPortal:   P66145
- SMR:   P66145
- GeneID:   1130620
- GenomeReviews:   AL592022_GR
- KEGG:   lin:lin1930
- GenoList:   LIN1930
- HOGENOM:   HBG597003
- OMA:   KCYVTGK
- ProtClustDB:   PRK00359
- BioCyc:   LINN272626:LIN1930-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 6991; Mature: 6860

Theoretical pI: Translated: 12.44; Mature: 12.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKPKKVWVSARALKSGKVE
CCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCCC
RV
CC
>Mature Secondary Structure 
AKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKPKKVWVSARALKSGKVE
CCCEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCCC
RV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669