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The map label for this gene is 226224433

Identifier: 226224433

GI number: 226224433

Start: 1892208

End: 1892807

Strand: Direct

Name: 226224433

Synonym: Lm4b_01846b

Alternate gene names: NA

Gene position: 1892208-1892807 (Clockwise)

Preceding gene: 226224432

Following gene: 226224444

Centisome position: 64.96

GC content: 40.83

Gene sequence:

>600_bases
ATGAAAATTTTATTAATTGGTGCTTCTGGTACGCTTGGCTCTGCGGTGAAAGAACGTTTGGAGAAAAAGGCCGAAGTGAT
TACTGCTGGTAGACATAGTGGTGATGTGACGGTGGATATTACGAGTGTCGATAGCATCAAAAAAATGTACGAACAGGTTG
GAAAAGTAGACGCAATTGTTTCAGCCACAGGAAGCGCCACTTTTTCTCCTTTAACAGAATTAACACCTGAGAAAAATGCA
GTGACGATTAGTAGTAAATTAGGTGGTCAAATTAATTTAGTTTTGCTGGGCATTAACTCATTGAATGATAATGGAAGCTT
CACTCTTACTACTGGCATTATGATGGAAGATCCAATCGTCCAAGGGGCTTCTGCTGCAATGGCAAATGGCGCGGTTACAG
CTTTTGCAAAATCTGCTGCGATTGAAATGCCACGTGGAATCCGGATTAATACAGTGAGCCCGAATATATTAGAAGAATCT
TGGGACAAACTAGAATCATTTTTCCAAGGTTTCGTTCCAGTTCCAGCCGCAAAAGTCGCTCGTGCGTTTGAAAAAAGCGT
CTTTGGTGCACAAACTGGTGAAAGTTATAAAGTATATTAA

Upstream 100 bases:

>100_bases
GTTAAAAAATTAACGGTTCCTTCCTGGAGCCGTTTTTTCTTTCTAATTTTAGGGTAGATGTGTACTGACTTTACTTTTTT
ATTGGAAGGATGATAGAGGA

Downstream 100 bases:

>100_bases
TAGAAAAAGAAGCTCACCGTAACAAAGGTGAGCTTCTTTTTATTTTCCCCAGTTTTCTGGATTTTTCTTCCATTCTTTTA
ATGTTTCCATATCTTCACCA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; Short-Chain Dehydrogenase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Aklaviketone Reductase; Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; DTDP-4-Dehydrorhamnose Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNA
VTISSKLGGQINLVLLGINSLNDNGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEES
WDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY

Sequences:

>Translated_199_residues
MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNA
VTISSKLGGQINLVLLGINSLNDNGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEES
WDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY
>Mature_199_residues
MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNA
VTISSKLGGQINLVLLGINSLNDNGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEES
WDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20916; Mature: 20916

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVDSIKKMYEQVGKVDAIV
CEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEECHHHHHHHHHHHCCHHEEE
SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGINSLNDNGSFTLTTGIMMEDPIV
ECCCCCCCCCHHHCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCEEEEECEEECCCCC
QGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEESWDKLESFFQGFVPVPAAKVA
CCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHH
RAFEKSVFGAQTGESYKVY
HHHHHHHCCCCCCCCEECC
>Mature Secondary Structure
MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVDSIKKMYEQVGKVDAIV
CEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEECHHHHHHHHHHHCCHHEEE
SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGINSLNDNGSFTLTTGIMMEDPIV
ECCCCCCCCCHHHCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCEEEEECEEECCCCC
QGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEESWDKLESFFQGFVPVPAAKVA
CCCHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHH
RAFEKSVFGAQTGESYKVY
HHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA