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The map label for this gene is yrrM [H]

Identifier: 226224099

GI number: 226224099

Start: 1512426

End: 1513079

Strand: Reverse

Name: yrrM [H]

Synonym: Lm4b_01508

Alternate gene names: 226224099

Gene position: 1513079-1512426 (Counterclockwise)

Preceding gene: 226224100

Following gene: 226224098

Centisome position: 51.95

GC content: 37.61

Gene sequence:

>654_bases
GTGAATGATATTATTCATGATTATTTATTAAAAAACATTCCTAAGAGCAGTCCTTTTTTTGAAGAATTAGAGGCGTATGC
GAAGGAAAATGAAGTACCGATTATGGAACCAGATTCTTTGTACTGCTTATTACAGATTTTAGATATCCAAAAACCAAAGC
GCATATTGGAGCTTGGGACGGCCATTGGGTACTCCGCTTTAAAAATGGCAGATAAACTTCCTGATGCAGAGATTATCACG
GTTGAGCGCGACGAAGAACGATATGAGCAAGCAATACATAATATTCAGCGCTACGGGGCTAATGACAGAGTGAAAGTTTT
ATTAACAGATGCTATTGAAGGAGCTGAAGAAATTTTGGCTCACGGTCCATTTGACGCAATATTTATTGATGCAGCCAAAG
CGCAATATGAGAAATTTTTCCATATTTATACCGATTCTTTAGCTGAAAATGGCGTTATTTATAGTGATAATGTTCTTTTT
AAAGGGTTAGCGCTAGATATGACACCAGAAAAACAACGCAAATTACGTGTTGCTAGGAAAATGCGCCATTTTAACGATTT
TTTAGTGACGCATCCTGATTTTGAAACAACGACCATTCCACTAGGGGACGGCCTATCTATTTCCAAAAGAAAGAAAACTG
GAGGCGTATCATGA

Upstream 100 bases:

>100_bases
AGAGCATATTACGAAAAATAATTAAAACAACCACTTGTCAGAAGCATGTTTAGCATGTTTTTGGCAGGTGCTTTGTTTGT
TAAGATAGGGGATCCTAGCA

Downstream 100 bases:

>100_bases
CAAAAAAACCAATCGTAGTCGGCGTAACTGGCGGTTCAGGTTCTGGTAAAACTAGTGTAACGAAAGCCATTTGTGATCAT
TTTAGCGGACACTCGATTTT

Product: O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIIT
VERDEERYEQAIHNIQRYGANDRVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLF
KGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS

Sequences:

>Translated_217_residues
MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIIT
VERDEERYEQAIHNIQRYGANDRVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLF
KGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS
>Mature_217_residues
MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIIT
VERDEERYEQAIHNIQRYGANDRVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLF
KGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17565612, Length=165, Percent_Identity=29.6969696969697, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 24691; Mature: 24691

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLLQILDIQKPKRILELGT
CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYGANDRVKVLLTDAIEGAEEILA
HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
HGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLFKGLALDMTPEKQRKLRVARK
CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCHHHHHHHHHHH
MRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS
HHHHHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLLQILDIQKPKRILELGT
CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYGANDRVKVLLTDAIEGAEEILA
HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
HGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLFKGLALDMTPEKQRKLRVARK
CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCHHHHHHHHHHH
MRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS
HHHHHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]