Click here to switch to the map view.

The map label for this gene is yrrL [H]

Identifier: 226224100

GI number: 226224100

Start: 1513155

End: 1514225

Strand: Reverse

Name: yrrL [H]

Synonym: Lm4b_01509

Alternate gene names: 226224100

Gene position: 1514225-1513155 (Counterclockwise)

Preceding gene: 226224102

Following gene: 226224099

Centisome position: 51.99

GC content: 32.87

Gene sequence:

>1071_bases
ATGAAGAATACAAAAGGTAAGAAAATTACAATTATAATTTCTGTTATTATTTTAATTTTAGTGATTGCAACTTTTTCAGG
TTATTATTATGTAAAATCGCAACTAGAACCAAAAGATGAAGCAAGTAAAGAGAAAATCACCGTAGAAATCCCAGCAGGCT
CTAGTATTTCAGACATTTCTACTATTCTAGAAGATAAAAAAGTAATTAATAATGCTTCTATTTTCTCGTTTTATGTAAAA
TATAATAATGATACGAATTTAAAAGCAGGGAACTATGAATTCAGTCCGTCGATGAACACAGATCAAATCGTCAAAAAAAT
GCAAGAAGGAAAAACGGTAGCACCTGCTAAACTGGTCATTCCAGAAGGTTACACGTTAGACCAAATTGCTGATAGAATTG
TTGCTTATCAACCAAAATTAAAAAAAGCAGATGTACTTAAAACAATGGACGATCCTGAATTTGTTGCTTCCATGATTAAA
GCATATCCAGATACAGTAACAAACGACGTATTAAACAAATCTATTAAACATCCATTAGAAGGTTATTTATATCCAGCTAC
TTACACCTTCAAAGGAACGGATGTATCTGCAGAACAAATTATTACAGAGATGGTCAAGGCAACGGATGTGAACATTGCTA
AGTACCGCGATGAACTAGCGAAACAAAAAATGTCTGTACACAAATTCTTAACGATGTCTTCCATTATCGAAAAAGAAGCA
ACTGAAAACGTAGATCGCAAAATGATTGCCAGCGTATTTTATAATCGTTTAGCAAAAGATATGCGATTGCAGACAGACCC
AACTGTTCTTTATGCGCTTGGTGAACACAAAAGTAAAACGACTTACAAAGATTTAGAAGTCGATTCACCATACAACACAT
ACAAAAACAATGGACTACCACCAGGTCCAATTTCAAATAGTGGAGACTCTTCGATGGAAGCAGCACTTTATCCAGAAAAA
AGTGATTACCTATACTTCTTAGCAAATACAAAAACTGGTAAAGTATACTTCTCTAAAACTTTAGAAGAGCACAATAAACT
AAAAGAAGAGCATATTACGAAAAATAATTAA

Upstream 100 bases:

>100_bases
AAAACGTCACTTTTTAAGAAAATTTTCCTTATTGAATAGCATTTTTTTTAGATAATCGGTATAATAGATTAGAATTGTTT
TCAATGAAATGAGGTCTAAA

Downstream 100 bases:

>100_bases
AACAACCACTTGTCAGAAGCATGTTTAGCATGTTTTTGGCAGGTGCTTTGTTTGTTAAGATAGGGGATCCTAGCAGTGAA
TGATATTATTCATGATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKNTKGKKITIIISVIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVK
YNNDTNLKAGNYEFSPSMNTDQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIK
AYPDTVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELAKQKMSVHKFLTMSSIIEKEA
TENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEK
SDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN

Sequences:

>Translated_356_residues
MKNTKGKKITIIISVIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVK
YNNDTNLKAGNYEFSPSMNTDQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIK
AYPDTVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELAKQKMSVHKFLTMSSIIEKEA
TENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEK
SDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN
>Mature_356_residues
MKNTKGKKITIIISVIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVK
YNNDTNLKAGNYEFSPSMNTDQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIK
AYPDTVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELAKQKMSVHKFLTMSSIIEKEA
TENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEK
SDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=341, Percent_Identity=34.3108504398827, Blast_Score=154, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 40127; Mature: 40127

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTKGKKITIIISVIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDIS
CCCCCCCEEEHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHH
TILEDKKVINNASIFSFYVKYNNDTNLKAGNYEFSPSMNTDQIVKKMQEGKTVAPAKLVI
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEC
PEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIKAYPDTVTNDVLNKSIKHPLE
CCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
GYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELAKQKMSVHKFLTMSSIIEKEA
CEEECEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLP
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCC
PGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN
CCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNTKGKKITIIISVIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDIS
CCCCCCCEEEHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHH
TILEDKKVINNASIFSFYVKYNNDTNLKAGNYEFSPSMNTDQIVKKMQEGKTVAPAKLVI
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEC
PEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIKAYPDTVTNDVLNKSIKHPLE
CCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
GYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELAKQKMSVHKFLTMSSIIEKEA
CEEECEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLP
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCC
PGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN
CCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]