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The map label for this gene is glpP [H]

Identifier: 226224006

GI number: 226224006

Start: 1418371

End: 1418919

Strand: Direct

Name: glpP [H]

Synonym: Lm4b_01414

Alternate gene names: 226224006

Gene position: 1418371-1418919 (Clockwise)

Preceding gene: 226224005

Following gene: 226224007

Centisome position: 48.7

GC content: 36.07

Gene sequence:

>549_bases
TTGGAGTTACCATTTTCCAATCAATCAATCATCCCAGCTGCACATAATCAAAAAGATATGGAAAAAATTTTAGAGCTTGA
TTTGACATATATGGTGATGCTGGAAACACATGTGGCTCAATTAAAAGCATTAGTCAAATACGCACAAGCCGGCGGGAAAA
AAGTTTTATTACATGCCGATTTAGTCAATGGACTGAAAAATGACGACTACGCAATAGACTTTTTATGTACAGAAATTTGT
CCTGATGGTATTATTTCGACTAGAGGAAATGCCATTATGAAAGCTAAACAGCACAAAATGCTAGCCATACAACGTCTTTT
CATGATTGATTCAAGCGCCTATAACAAAGGTGTAGCATTGATACAAAAAGTCCAACCTGATTGTATTGAACTTTTACCAG
GTATTATTCCTGAGCAAGTACAAAAGATGACTCAAAAGCTTCATATCCCTGTAATTGCAGGAGGATTAATTGAAACTAGT
GAACAAGTCAATCAAGTAATAGCTAGCGGGGCCATCGCAGTTACAACATCCAATAAACATTTATGGTAA

Upstream 100 bases:

>100_bases
CCATTCACTTGTCCTCATGGACGTCCGGTGATTATCCAATACTCAACATATGAACTAGAAAAAATGTTTAAACGTGTGAT
GTAAAAGAGGAGGAAATAAT

Downstream 100 bases:

>100_bases
ATAAACAGCTAAGTCGTGTAGCAATAACGACTTAGCTGTTCTTATGAAAAACAATGAAAACGCTATATTTACCCGTGGAA
CATTGCTAGACAACGTTTTA

Product: anti-terminator regulatory protein GlpP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEIC
PDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETS
EQVNQVIASGAIAVTTSNKHLW

Sequences:

>Translated_182_residues
MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEIC
PDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETS
EQVNQVIASGAIAVTTSNKHLW
>Mature_182_residues
MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEIC
PDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETS
EQVNQVIASGAIAVTTSNKHLW

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription [H]

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=173, Percent_Identity=30.0578034682081, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 20059; Mature: 20059

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
LVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVAL
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKH
HHHCCHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCEEEEEECCCC
LW
CC
>Mature Secondary Structure
MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
LVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVAL
HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKH
HHHCCHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCEEEEEECCCC
LW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377 [H]